File | Date | Author | Commit |
---|---|---|---|
cgi-bin | 2017-11-02 |
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[a8b110] New masker-specific tag names |
html | 2019-03-20 |
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[21eb9a] Update primer3web_help.htm |
tests | 2013-01-24 |
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[c9db40] fixed a bug; updated test outputs |
.gitignore | 2017-10-30 |
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[02e278] added .DS_Store to .gitignore |
LICENSE | 2017-10-28 |
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[9eb0bd] Adapted to GitHub and replaced help file |
README.md | 2017-10-28 |
![]() |
[9eb0bd] Adapted to GitHub and replaced help file |
GPL 2.0 license (please see gpl-2.0.txt)
Copyright (c) 1996,1997,1998,1999,2000,2001,2004,2006,2007,
2008,2009,2010,2011,2012,2013,2017
Whitehead Institute for Biomedical Research, Steve Rozen
(http://steverozen.net), Andreas Untergasser, Maido Remm, Triinu Koressaar and Helen Skaletsky
All rights reserved.
This file contains instructions for installing the
primer3 web interface (release 4.1.0). This interface
is provided strictly 'as-is'.
To install the web interface you will need:
a. primer3_core, which is written in C and which, at this
point, you must compile yourself. You can find links
to the C code for primer3_core from
http://sourceforge.net/projects/primer3.
b. primer3web-4.1.0.tar.gz (available
from http://sourceforge.net/projects/primer3)
c. The perl module CGI.pm (available from CPAN,
http://cpan.org, if it is not already available
in your perl installation).
gunzip and untar primer3web-4.1.0.tar.gz.
** This will put the constituent files in
the current working directory.
There will be 2 directories after gunzip and untar:
html and cgi-bin.
Copy all files in the html directory to your .../html or
.../htdocs directory or equivalent.
Copy all files in cgi-bin directory to your .../cgi-bin
directory or equivalent.
Build primer3_core (anywhere) and copy or move it to
the directory containing the files from cgi-bin of
primer3web-4.1.0.tar.gz. In addition,
confirm that the this directory contains the
subdirectory primer3_config/.
(Background: running primer3_core requires the
directory primer3_config and its contents. This
directory is provided in
primer3web-4.1.0.tar.gz as ./cgi-bin/primer3_config/.
By default this primer3_config
needs to be in the current working directory when
primer3_core is executed.)