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#5 about Mauve

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nobody
None
Medium
Defect
2013-08-06
2012-04-03
Anonymous
No

Originally created by: zjas... (code.google.com)@gmail.com

Hello, I'm just wondering if Mauve installation is required for other scipts besides mauve-parser.pl ? I ask because I'd rather not install it if it isn't necessary. Thanks.

Discussion

  • Anonymous

    Anonymous - 2012-10-30

    Originally posted by: RoKof... (code.google.com)@gmail.com

    no its not necessary

     
  • Anonymous

    Anonymous - 2013-08-06

    Originally posted by: Claudia.... (code.google.com)@gmail.com

    Dear Robert,

    I am working with 100bp paired end data which I have aligned using BWA. I am wondering what advantage an alignment with Mauve offers over BWA.

    Is there a way of calculating Dxy with Popoolation without using a Mauve genome alignment, but e.g. the BWA alignment I already have?

    Thanks, Claudi

     

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