subsampling gives error
estimate natural variation and positive selection
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#19 subsampling gives error
When I am creating subsampled mpileup, I am seeing this error:
"size of sequence does not equal size of quality: AaAaAaAAAAAAAAaAAaaAAaaaAAaAaaAaAAaaaaaaaaAAaaaAAAAAaAAaaaAAAAAAAAAAaaAaaaaAaaaAaAAaaAaAAaaaaaaAAAAAaaaaaA, IJ<JJJJFJAJFJJFJJJJJJJJJJJJJJJJJJFJJJJJJJJJJJJJF7JJJJAJJJ<JJJJFJJJJJJJJJJJJJJJFJJJJJJJJJFJJJJ"
I know the problem is with my mpileup, but I am hoping you can provide a solution. Is manually deleting using grep a viable scientific option?
