From: <wd...@us...> - 2009-03-24 21:35:59
|
Revision: 555 http://phenoscape.svn.sourceforge.net/phenoscape/?rev=555&view=rev Author: wdahdul Date: 2009-03-24 21:35:44 +0000 (Tue, 24 Mar 2009) Log Message: ----------- annotated chars 59, 61, 63, 68-70, 95-96, 100, 102, 117-119, 123 with phenoscape slim for PATO Modified Paths: -------------- trunk/data/phenex-files/Characiformes/Castro_Vari_2004.xml Modified: trunk/data/phenex-files/Characiformes/Castro_Vari_2004.xml =================================================================== --- trunk/data/phenex-files/Characiformes/Castro_Vari_2004.xml 2009-03-24 17:48:36 UTC (rev 554) +++ trunk/data/phenex-files/Characiformes/Castro_Vari_2004.xml 2009-03-24 21:35:44 UTC (rev 555) @@ -2809,10 +2809,21 @@ <any> <phen:phenotype> <phen:phenotype_character> + <phen:bearer> + <phen:typeref about="TAO:0000422"/> + </phen:bearer> <phen:quality> - <phen:typeref about="PATO:0000117"/> + <phen:typeref about="PATO:0000140"/> </phen:quality> </phen:phenotype_character> + <phen:phenotype_character> + <phen:bearer> + <phen:typeref about="TAO:0000422"/> + </phen:bearer> + <phen:quality> + <phen:typeref about="PATO:0000052"/> + </phen:quality> + </phen:phenotype_character> </phen:phenotype> </any> </dict> @@ -2823,10 +2834,21 @@ <any> <phen:phenotype> <phen:phenotype_character> + <phen:bearer> + <phen:typeref about="TAO:0000422"/> + </phen:bearer> <phen:quality> - <phen:typeref about="PATO:0000117"/> + <phen:typeref about="PATO:0000052"/> </phen:quality> </phen:phenotype_character> + <phen:phenotype_character> + <phen:bearer> + <phen:typeref about="TAO:0000422"/> + </phen:bearer> + <phen:quality> + <phen:typeref about="PATO:0000140"/> + </phen:quality> + </phen:phenotype_character> </phen:phenotype> </any> </dict> @@ -2875,17 +2897,142 @@ </state> </states> <states id="ef3421f2-4ec6-4fc1-a3e0-a3f4af8c45bd"> - <state id="b9518bb5-442e-42e7-9311-8f23430aaf7b" label="Attachment onto anteromedially situated, highly developed, distinct, lever-like process of maxilla" symbol="1"/> - <state id="4bfa6c99-f617-45af-80db-5339dc0581ef" label="Attachment onto dorsal or medial surface of maxilla either directly to main body of bone or to small ridge that arises from ossification" symbol="0"/> + <state id="b9518bb5-442e-42e7-9311-8f23430aaf7b" label="Attachment onto anteromedially situated, highly developed, distinct, lever-like process of maxilla" symbol="1"> + <dict> + <key>OBO_phenotype</key> + <any> + <phen:phenotype> + <phen:phenotype_character> + <phen:bearer> + <phen:typeref about="TAO:0001828"/> + </phen:bearer> + <phen:quality> + <phen:typeref about="PATO:0000140"/> + </phen:quality> + </phen:phenotype_character> + </phen:phenotype> + </any> + </dict> + </state> + <state id="4bfa6c99-f617-45af-80db-5339dc0581ef" label="Attachment onto dorsal or medial surface of maxilla either directly to main body of bone or to small ridge that arises from ossification" symbol="0"> + <dict> + <key>OBO_phenotype</key> + <any> + <phen:phenotype> + <phen:phenotype_character> + <phen:bearer> + <phen:typeref about="TAO:0001828"/> + </phen:bearer> + <phen:quality> + <phen:typeref about="PATO:0000140"/> + </phen:quality> + </phen:phenotype_character> + </phen:phenotype> + </any> + </dict> + </state> </states> <states id="0d809a05-2430-404b-9dfe-9d920b38cd73"> - <state id="1321f798-05a2-40c4-b4a4-ffbe177ecc2b" label="Anterior margin of first infraorbital approaches or contacts ventral surface of nasal, and first infraorbital medially curved with distinct ridge on medial surface of bone" symbol="1"/> - <state id="06588cca-04f8-4c5b-8195-b025420e007a" label="Anterior margin of first infraorbital falls distinctly short of ventral margin of nasal and overall form of first infraorbital relatively flat and without ridge on medial surface of bone;" symbol="0"/> + <state id="1321f798-05a2-40c4-b4a4-ffbe177ecc2b" label="Anterior margin of first infraorbital approaches or contacts ventral surface of nasal, and first infraorbital medially curved with distinct ridge on medial surface of bone" symbol="1"> + <dict> + <key>OBO_phenotype</key> + <any> + <phen:phenotype> + <phen:phenotype_character> + <phen:bearer> + <phen:typeref about="TAO:0000223"/> + </phen:bearer> + <phen:quality> + <phen:typeref about="PATO:0000140"/> + </phen:quality> + </phen:phenotype_character> + <phen:phenotype_character> + <phen:bearer> + <phen:typeref about="TAO:0000223"/> + </phen:bearer> + <phen:quality> + <phen:typeref about="PATO:0000052"/> + </phen:quality> + </phen:phenotype_character> + </phen:phenotype> + </any> + </dict> + </state> + <state id="06588cca-04f8-4c5b-8195-b025420e007a" label="Anterior margin of first infraorbital falls distinctly short of ventral margin of nasal and overall form of first infraorbital relatively flat and without ridge on medial surface of bone;" symbol="0"> + <dict> + <key>OBO_phenotype</key> + <any> + <phen:phenotype> + <phen:phenotype_character> + <phen:bearer> + <phen:typeref about="TAO:0000223"/> + </phen:bearer> + <phen:quality> + <phen:typeref about="PATO:0000052"/> + </phen:quality> + </phen:phenotype_character> + <phen:phenotype_character> + <phen:bearer> + <phen:typeref about="TAO:0000223"/> + </phen:bearer> + <phen:quality> + <phen:typeref about="TAO:0000539"/> + </phen:quality> + </phen:phenotype_character> + </phen:phenotype> + </any> + </dict> + </state> </states> <states id="446cff3e-63fb-445f-9ae6-3bf37d8726e7"> - <state id="0344eea1-45a7-4cf1-b9b4-efeadf758239" label="Present and moderately developed" symbol="1"/> - <state id="5c5ca909-117b-4463-8547-6291e7638c40" label="Absent;" symbol="0"/> - <state id="ced6df5e-3061-4f97-bd7b-81f216f5b6eb" label="Present and highly developed" symbol="2"/> + <state id="0344eea1-45a7-4cf1-b9b4-efeadf758239" label="Present and moderately developed" symbol="1"> + <dict> + <key>OBO_phenotype</key> + <any> + <phen:phenotype> + <phen:phenotype_character> + <phen:bearer> + <phen:typeref about="TAO:0001811"/> + </phen:bearer> + <phen:quality> + <phen:typeref about="PATO:0000052"/> + </phen:quality> + </phen:phenotype_character> + </phen:phenotype> + </any> + </dict> + </state> + <state id="5c5ca909-117b-4463-8547-6291e7638c40" label="Absent;" symbol="0"> + <dict> + <key>OBO_phenotype</key> + <any> + <phen:phenotype> + <phen:phenotype_character> + <phen:bearer> + <phen:typeref about="TAO:0001811"/> + </phen:bearer> + <phen:quality> + <phen:typeref about="PATO:0000052"/> + </phen:quality> + </phen:phenotype_character> + </phen:phenotype> + </any> + </dict> + </state> + <state id="ced6df5e-3061-4f97-bd7b-81f216f5b6eb" label="Present and highly developed" symbol="2"> + <dict> + <key>OBO_phenotype</key> + <any> + <phen:phenotype> + <phen:phenotype_character> + <phen:bearer> + <phen:typeref about="TAO:0001811"/> + </phen:bearer> + </phen:phenotype_character> + </phen:phenotype> + </any> + </dict> + </state> </states> <states id="dcd8f62d-f4f4-4fee-a39e-2ce14c459fa5"> <state id="e2b3c51b-ddb5-44ee-8827-577335166f92" label="Not indented" symbol="0"> @@ -3061,9 +3208,57 @@ </state> </states> <states id="4fa20ac7-fa94-4803-b7da-42b8ea1378a9"> - <state id="42ae03d6-2cc1-40b0-ba1e-26f51b995b23" label="With two secondary canals that arise from ventral margin of primary canal" symbol="1"/> - <state id="7182a48c-2891-40c8-a191-781ef1c31fd7" label="Relatively simple, without series of secondary canals that arise from ventral margin of primary canal" symbol="0"/> - <state id="6985b91e-0952-4bb0-b603-cf49274b6915" label="With three or four secondary canals that arise from ventral margin of primary canal" symbol="2"/> + <state id="42ae03d6-2cc1-40b0-ba1e-26f51b995b23" label="With two secondary canals that arise from ventral margin of primary canal" symbol="1"> + <dict> + <key>OBO_phenotype</key> + <any> + <phen:phenotype> + <phen:phenotype_character> + <phen:bearer> + <phen:typeref about="TAO:0001811"/> + </phen:bearer> + <phen:quality> + <phen:typeref about="PATO:0000052"/> + </phen:quality> + </phen:phenotype_character> + </phen:phenotype> + </any> + </dict> + </state> + <state id="7182a48c-2891-40c8-a191-781ef1c31fd7" label="Relatively simple, without series of secondary canals that arise from ventral margin of primary canal" symbol="0"> + <dict> + <key>OBO_phenotype</key> + <any> + <phen:phenotype> + <phen:phenotype_character> + <phen:bearer> + <phen:typeref about="TAO:0001811"/> + </phen:bearer> + <phen:quality> + <phen:typeref about="PATO:0000052"/> + </phen:quality> + </phen:phenotype_character> + </phen:phenotype> + </any> + </dict> + </state> + <state id="6985b91e-0952-4bb0-b603-cf49274b6915" label="With three or four secondary canals that arise from ventral margin of primary canal" symbol="2"> + <dict> + <key>OBO_phenotype</key> + <any> + <phen:phenotype> + <phen:phenotype_character> + <phen:bearer> + <phen:typeref about="TAO:0001811"/> + </phen:bearer> + <phen:quality> + <phen:typeref about="PATO:0000052"/> + </phen:quality> + </phen:phenotype_character> + </phen:phenotype> + </any> + </dict> + </state> </states> <states id="40b15379-5cbe-42c6-a8f4-d5e24d7fe196"> <state id="984d8795-cbe0-4377-9e4d-ca136f2a5285" label="Wide;" symbol="0"> @@ -3102,8 +3297,40 @@ </state> </states> <states id="a3a8de9f-24ee-4a61-8df2-e7747dad0224"> - <state id="76be4ee5-10b5-4fa7-898e-83f81eb7aad6" label="Branch terminates at, or anterior of, posterior margin of bone" symbol="0"/> - <state id="49276f59-b21c-48a3-8888-63d27d458bc7" label="Branch extends as bony tube beyond posterior margin of bone." symbol="1"/> + <state id="76be4ee5-10b5-4fa7-898e-83f81eb7aad6" label="Branch terminates at, or anterior of, posterior margin of bone" symbol="0"> + <dict> + <key>OBO_phenotype</key> + <any> + <phen:phenotype> + <phen:phenotype_character> + <phen:bearer> + <phen:typeref about="TAO:0001811"/> + </phen:bearer> + <phen:quality> + <phen:typeref about="PATO:0000140"/> + </phen:quality> + </phen:phenotype_character> + </phen:phenotype> + </any> + </dict> + </state> + <state id="49276f59-b21c-48a3-8888-63d27d458bc7" label="Branch extends as bony tube beyond posterior margin of bone." symbol="1"> + <dict> + <key>OBO_phenotype</key> + <any> + <phen:phenotype> + <phen:phenotype_character> + <phen:bearer> + <phen:typeref about="TAO:0001811"/> + </phen:bearer> + <phen:quality> + <phen:typeref about="PATO:0000140"/> + </phen:quality> + </phen:phenotype_character> + </phen:phenotype> + </any> + </dict> + </state> </states> <states id="c34ad0b0-4533-4662-be7d-bd28fad214c0"> <state id="598feb9a-73f6-4ba2-84c9-242fb099fa08" label="Approximately straight" symbol="0"> @@ -3402,13 +3629,181 @@ <state id="0b30092e-e0ed-4383-b375-f41c8a81b3fb" label="With three or four simple or moderately developed but not ramified secondary canals at angle of ossification" symbol="0"/> </states> <states id="08d6cbc1-a3c2-437b-83da-39b383b60239"> - <state id="7e642b90-4d9a-4e41-8ec3-4216ff3385fb" label="Unelaborated or with slightly developed, longitudinal ridge" symbol="0"/> - <state id="803bd6af-aec1-4234-b87e-cf4e37832863" label="With distinct, horizontal, shelf-like ridge" symbol="1"/> + <state id="7e642b90-4d9a-4e41-8ec3-4216ff3385fb" label="Unelaborated or with slightly developed, longitudinal ridge" symbol="0"> + <dict> + <key>OBO_phenotype</key> + <any> + <phen:phenotype> + <phen:phenotype_character> + <phen:bearer> + <phen:typeref about="BSPO:0000383"> + <phen:qualifier relation="OBO_REL:part_of"> + <phen:holds_in_relation_to> + <phen:typeref about="TAO:0000289"/> + </phen:holds_in_relation_to> + </phen:qualifier> + </phen:typeref> + </phen:bearer> + <phen:quality> + <phen:typeref about="PATO:0000052"/> + </phen:quality> + </phen:phenotype_character> + </phen:phenotype> + </any> + </dict> + </state> + <state id="803bd6af-aec1-4234-b87e-cf4e37832863" label="With distinct, horizontal, shelf-like ridge" symbol="1"> + <dict> + <key>OBO_phenotype</key> + <any> + <phen:phenotype> + <phen:phenotype_character> + <phen:bearer> + <phen:typeref about="BSPO:0000383"> + <phen:qualifier relation="OBO_REL:part_of"> + <phen:holds_in_relation_to> + <phen:typeref about="TAO:0000289"/> + </phen:holds_in_relation_to> + </phen:qualifier> + </phen:typeref> + </phen:bearer> + <phen:quality> + <phen:typeref about="PATO:0000052"/> + </phen:quality> + </phen:phenotype_character> + </phen:phenotype> + </any> + </dict> + </state> </states> <states id="96355e00-f2e3-4648-ab60-1456c70009e8"> - <state id="1e044fdf-24b0-48af-aac3-3e98f78f5e9b" label="Moderately developed and almost horizontally aligned" symbol="1"/> - <state id="221f82eb-ad61-4db7-adec-d233f8807ba7" label="Absent" symbol="0"/> - <state id="49ab4943-f982-4f7b-acc1-a7ab8f888831" label="Highly developed and dorsomedially inclined." symbol="2"/> + <state id="1e044fdf-24b0-48af-aac3-3e98f78f5e9b" label="Moderately developed and almost horizontally aligned" symbol="1"> + <dict> + <key>OBO_phenotype</key> + <any> + <phen:phenotype> + <phen:phenotype_character> + <phen:bearer> + <phen:typeref about="TAO:0001834"> + <phen:qualifier relation="OBO_REL:part_of"> + <phen:holds_in_relation_to> + <phen:typeref about="BSPO:0000383"> + <phen:qualifier relation="OBO_REL:part_of"> + <phen:holds_in_relation_to> + <phen:typeref about="TAO:0000264"/> + </phen:holds_in_relation_to> + </phen:qualifier> + </phen:typeref> + </phen:holds_in_relation_to> + </phen:qualifier> + </phen:typeref> + </phen:bearer> + <phen:quality> + <phen:typeref about="PATO:0001855"/> + </phen:quality> + </phen:phenotype_character> + <phen:phenotype_character> + <phen:bearer> + <phen:typeref about="TAO:0001834"> + <phen:qualifier relation="OBO_REL:part_of"> + <phen:holds_in_relation_to> + <phen:typeref about="BSPO:0000383"> + <phen:qualifier relation="OBO_REL:part_of"> + <phen:holds_in_relation_to> + <phen:typeref about="TAO:0000264"/> + </phen:holds_in_relation_to> + </phen:qualifier> + </phen:typeref> + </phen:holds_in_relation_to> + </phen:qualifier> + </phen:typeref> + </phen:bearer> + <phen:quality> + <phen:typeref about="PATO:0000117"/> + </phen:quality> + </phen:phenotype_character> + </phen:phenotype> + </any> + </dict> + </state> + <state id="221f82eb-ad61-4db7-adec-d233f8807ba7" label="Absent" symbol="0"> + <dict> + <key>OBO_phenotype</key> + <any> + <phen:phenotype> + <phen:phenotype_character> + <phen:bearer> + <phen:typeref about="TAO:0001834"> + <phen:qualifier relation="OBO_REL:part_of"> + <phen:holds_in_relation_to> + <phen:typeref about="BSPO:0000383"> + <phen:qualifier relation="OBO_REL:part_of"> + <phen:holds_in_relation_to> + <phen:typeref about="TAO:0000264"/> + </phen:holds_in_relation_to> + </phen:qualifier> + </phen:typeref> + </phen:holds_in_relation_to> + </phen:qualifier> + </phen:typeref> + </phen:bearer> + <phen:quality> + <phen:typeref about="PATO:0000462"/> + </phen:quality> + </phen:phenotype_character> + </phen:phenotype> + </any> + </dict> + </state> + <state id="49ab4943-f982-4f7b-acc1-a7ab8f888831" label="Highly developed and dorsomedially inclined." symbol="2"> + <dict> + <key>OBO_phenotype</key> + <any> + <phen:phenotype> + <phen:phenotype_character> + <phen:bearer> + <phen:typeref about="TAO:0001834"> + <phen:qualifier relation="OBO_REL:part_of"> + <phen:holds_in_relation_to> + <phen:typeref about="BSPO:0000383"> + <phen:qualifier relation="OBO_REL:part_of"> + <phen:holds_in_relation_to> + <phen:typeref about="TAO:0000264"/> + </phen:holds_in_relation_to> + </phen:qualifier> + </phen:typeref> + </phen:holds_in_relation_to> + </phen:qualifier> + </phen:typeref> + </phen:bearer> + <phen:quality> + <phen:typeref about="PATO:0000117"/> + </phen:quality> + </phen:phenotype_character> + <phen:phenotype_character> + <phen:bearer> + <phen:typeref about="TAO:0001834"> + <phen:qualifier relation="OBO_REL:part_of"> + <phen:holds_in_relation_to> + <phen:typeref about="BSPO:0000383"> + <phen:qualifier relation="OBO_REL:part_of"> + <phen:holds_in_relation_to> + <phen:typeref about="TAO:0000264"/> + </phen:holds_in_relation_to> + </phen:qualifier> + </phen:typeref> + </phen:holds_in_relation_to> + </phen:qualifier> + </phen:typeref> + </phen:bearer> + <phen:quality> + <phen:typeref about="PATO:0000140"/> + </phen:quality> + </phen:phenotype_character> + </phen:phenotype> + </any> + </dict> + </state> </states> <states id="f22969ce-e864-4d83-be6e-4bdd48c2b80c"> <state id="3ec7e267-26f2-413d-a74c-cdd4ffb9496f" label="Present." symbol="1"/> @@ -3456,16 +3851,104 @@ </state> </states> <states id="ec8d819f-a8a4-4194-a802-61d76589df3f"> - <state id="e2850696-a3cf-4c40-b942-7e9fd523c82d" label="Unelaborated;" symbol="0"/> - <state id="170f4f8b-e678-4962-9935-471ece2a7cc7" label="With laterally compressed, ventromedial process." symbol="1"/> + <state id="e2850696-a3cf-4c40-b942-7e9fd523c82d" label="Unelaborated;" symbol="0"> + <dict> + <key>OBO_phenotype</key> + <any> + <phen:phenotype> + <phen:phenotype_character> + <phen:bearer> + <phen:typeref about="TAO:0001834"> + <phen:qualifier relation="OBO_REL:part_of"> + <phen:holds_in_relation_to> + <phen:typeref about="BSPO:0000384"> + <phen:qualifier relation="OBO_REL:part_of"> + <phen:holds_in_relation_to> + <phen:typeref about="TAO:0000323"/> + </phen:holds_in_relation_to> + </phen:qualifier> + </phen:typeref> + </phen:holds_in_relation_to> + </phen:qualifier> + </phen:typeref> + </phen:bearer> + <phen:quality> + <phen:typeref about="PATO:0000462"/> + </phen:quality> + </phen:phenotype_character> + </phen:phenotype> + </any> + </dict> + </state> + <state id="170f4f8b-e678-4962-9935-471ece2a7cc7" label="With laterally compressed, ventromedial process." symbol="1"> + <dict> + <key>OBO_phenotype</key> + <any> + <phen:phenotype> + <phen:phenotype_character> + <phen:bearer> + <phen:typeref about="TAO:0001834"> + <phen:qualifier relation="OBO_REL:part_of"> + <phen:holds_in_relation_to> + <phen:typeref about="BSPO:0000384"> + <phen:qualifier relation="OBO_REL:part_of"> + <phen:holds_in_relation_to> + <phen:typeref about="TAO:0000323"/> + </phen:holds_in_relation_to> + </phen:qualifier> + </phen:typeref> + </phen:holds_in_relation_to> + </phen:qualifier> + </phen:typeref> + </phen:bearer> + <phen:quality> + <phen:typeref about="PATO:0000467"/> + </phen:quality> + </phen:phenotype_character> + </phen:phenotype> + </any> + </dict> + </state> </states> <states id="88b20fce-d531-43ed-9a2f-cdd92209e25f"> <state id="da63f860-9559-44f0-bdc3-feb1112da7c9" label="Anterior portion of mesethmoid distinctly wide; width more than twice width of frontal portion of median cranial fontanelle" symbol="1"/> <state id="70335064-1165-42ac-b613-7bbe616ed262" label="Anterior portion of mesethmoid only moderately wide; width approximately equal to width of frontal portion of median cranial fontanelle" symbol="0"/> </states> <states id="0319e233-256e-4fc8-a591-c3b72f3d0c1c"> - <state id="b09c6655-963b-4d17-be74-ca0e935cc483" label="Not as in State 1" symbol="0"/> - <state id="e3716531-94b2-462b-ac48-474ebbed75eb" label="In form of large, horizontally rounded structure that contacts anterior process and main body of lateral ethmoid" symbol="1"/> + <state id="b09c6655-963b-4d17-be74-ca0e935cc483" label="Not as in State 1" symbol="0"> + <dict> + <key>OBO_phenotype</key> + <any> + <phen:phenotype> + <phen:phenotype_character> + <phen:bearer> + <phen:typeref about="TAO:0000308"/> + </phen:bearer> + <phen:quality> + <phen:typeref about="PATO:0000052"/> + </phen:quality> + </phen:phenotype_character> + </phen:phenotype> + </any> + </dict> + </state> + <state id="e3716531-94b2-462b-ac48-474ebbed75eb" label="In form of large, horizontally rounded structure that contacts anterior process and main body of lateral ethmoid" symbol="1"> + <dict> + <key>OBO_phenotype</key> + <any> + <phen:phenotype> + <phen:phenotype_character> + <phen:bearer> + <phen:typeref about="TAO:0000308"/> + </phen:bearer> + <phen:quality> + <phen:typeref about="PATO:0000052"/> + </phen:quality> + </phen:phenotype_character> + </phen:phenotype> + </any> + </dict> + </state> </states> <states id="57e256b1-0885-4aca-9bd1-a25cba16a396"> <state id="01deca3e-c846-4f9c-9f86-3d4c642f2614" label="Narrow;" symbol="0"/> @@ -3522,20 +4005,123 @@ <state id="3b1d776c-add8-4aed-b7dc-53cf0cf9bfa4" label="Present." symbol="1"/> </states> <states id="b7e77b91-83ba-4dec-b7ee-e1b5df4bb558"> - <state id="0539d2ae-d19b-4c74-b34f-46b07c587bce" label="Absent;" symbol="0"/> + <state id="0539d2ae-d19b-4c74-b34f-46b07c587bce" label="Absent;" symbol="0"> + <dict> + <key>OBO_phenotype</key> + <any> + <phen:phenotype/> + </any> + </dict> + </state> <state id="56960ffa-0eb8-4e4b-91c9-3dbd70961e5f" label="Present." symbol="1"/> </states> <states id="c9d0112a-8279-4837-b716-3002e1db9e24"> - <state id="52dab03f-caa0-486b-a878-ad28c73c9585" label="Present." symbol="1"/> - <state id="a2828da2-2f18-4e88-8894-8c7e981afd3b" label="Absent;" symbol="0"/> + <state id="52dab03f-caa0-486b-a878-ad28c73c9585" label="Present." symbol="1"> + <dict> + <key>OBO_phenotype</key> + <any> + <phen:phenotype> + <phen:phenotype_character> + <phen:bearer> + <phen:typeref about="TAO:0001162"/> + </phen:bearer> + <phen:quality> + <phen:typeref about="PATO:0000019"/> + </phen:quality> + </phen:phenotype_character> + </phen:phenotype> + </any> + </dict> + </state> + <state id="a2828da2-2f18-4e88-8894-8c7e981afd3b" label="Absent;" symbol="0"> + <dict> + <key>OBO_phenotype</key> + <any> + <phen:phenotype> + <phen:phenotype_character> + <phen:bearer> + <phen:typeref about="TAO:0001162"/> + </phen:bearer> + <phen:quality> + <phen:typeref about="PATO:0000019"/> + </phen:quality> + </phen:phenotype_character> + </phen:phenotype> + </any> + </dict> + </state> </states> <states id="8419ed07-5769-4641-871f-f2d8789d1010"> - <state id="3c9787b7-ae96-4309-b350-8ac64b358a18" label="Absent;" symbol="0"/> - <state id="c3c70ad6-7df8-4f3f-b082-3978fdf6332a" label="Present." symbol="1"/> + <state id="3c9787b7-ae96-4309-b350-8ac64b358a18" label="Absent;" symbol="0"> + <dict> + <key>OBO_phenotype</key> + <any> + <phen:phenotype> + <phen:phenotype_character> + <phen:bearer> + <phen:typeref about="TAO:0001058"/> + </phen:bearer> + <phen:quality> + <phen:typeref about="PATO:0000019"/> + </phen:quality> + </phen:phenotype_character> + </phen:phenotype> + </any> + </dict> + </state> + <state id="c3c70ad6-7df8-4f3f-b082-3978fdf6332a" label="Present." symbol="1"> + <dict> + <key>OBO_phenotype</key> + <any> + <phen:phenotype> + <phen:phenotype_character> + <phen:bearer> + <phen:typeref about="TAO:0001058"/> + </phen:bearer> + <phen:quality> + <phen:typeref about="PATO:0000019"/> + </phen:quality> + </phen:phenotype_character> + </phen:phenotype> + </any> + </dict> + </state> </states> <states id="948b5ce6-94ca-43b3-84db-5046a5e60517"> - <state id="52034d72-b9db-4a83-a7a9-b3fd8f90de8d" label="Absent;" symbol="0"/> - <state id="0be31c42-b629-4b5f-b7f2-014ecf61e589" label="Present." symbol="1"/> + <state id="52034d72-b9db-4a83-a7a9-b3fd8f90de8d" label="Absent;" symbol="0"> + <dict> + <key>OBO_phenotype</key> + <any> + <phen:phenotype> + <phen:phenotype_character> + <phen:bearer> + <phen:typeref about="TAO:0001058"/> + </phen:bearer> + <phen:quality> + <phen:typeref about="PATO:0000019"/> + </phen:quality> + </phen:phenotype_character> + </phen:phenotype> + </any> + </dict> + </state> + <state id="0be31c42-b629-4b5f-b7f2-014ecf61e589" label="Present." symbol="1"> + <dict> + <key>OBO_phenotype</key> + <any> + <phen:phenotype> + <phen:phenotype_character> + <phen:bearer> + <phen:typeref about="TAO:0001058"/> + </phen:bearer> + <phen:quality> + <phen:typeref about="PATO:0000019"/> + </phen:quality> + </phen:phenotype_character> + </phen:phenotype> + </any> + </dict> + </state> </states> <states id="dfa3fc2a-2530-4717-b7bf-066867ca84a2"> <state id="c55d461e-503f-4aae-ad01-f2ccb2dfd520" label="Absent;" symbol="0"/> @@ -3551,8 +4137,40 @@ <state id="dade5147-50bf-40da-a878-02fc4c344a84" label="Absent;" symbol="0"/> </states> <states id="8c1eb465-e953-4224-8457-319162886fc9"> - <state id="efa6bcd4-99a7-47e6-92f0-b30575e5c160" label="Not as in State 1" symbol="0"/> - <state id="3430c991-a8fb-4fc4-ba7c-d76ab0d28800" label="With alternating rows that form small flat spines marginally and remnants submarginally that have fused into the posterior field" symbol="1"/> + <state id="efa6bcd4-99a7-47e6-92f0-b30575e5c160" label="Not as in State 1" symbol="0"> + <dict> + <key>OBO_phenotype</key> + <any> + <phen:phenotype> + <phen:phenotype_character> + <phen:bearer> + <phen:typeref about="TAO:0000277"/> + </phen:bearer> + <phen:quality> + <phen:typeref about="PATO:0000052"/> + </phen:quality> + </phen:phenotype_character> + </phen:phenotype> + </any> + </dict> + </state> + <state id="3430c991-a8fb-4fc4-ba7c-d76ab0d28800" label="With alternating rows that form small flat spines marginally and remnants submarginally that have fused into the posterior field" symbol="1"> + <dict> + <key>OBO_phenotype</key> + <any> + <phen:phenotype> + <phen:phenotype_character> + <phen:bearer> + <phen:typeref about="TAO:0000277"/> + </phen:bearer> + <phen:quality> + <phen:typeref about="PATO:0000052"/> + </phen:quality> + </phen:phenotype_character> + </phen:phenotype> + </any> + </dict> + </state> </states> <states id="1883f732-d6f0-4035-b796-1de4150a667b"> <state id="467e2a84-f73b-4254-b93f-46c2a30788a7" label="Present" symbol="1"/> This was sent by the SourceForge.net collaborative development platform, the world's largest Open Source development site. |