Protein Family Alignment Annotation Tool svncode

Updated to set Low Q2 value in a variable

Updated to display Low Q2 value in warning message dialog in PLS Module

Update to add showdialog method which accepts dialog size

Updated to change from modal to non-modal dialog.

Fix so secondary struct line annot is only applied to parts of sequene with structure.

fix secondary structure so Coils are only assigned parts of sequence with structure.

fix typo where wrong res was specified

Added fix for exclude column with gaps bug.

Check that no. of X vars /cols used as input for training = no cols for predicting.

report all X variable columns in pred.txt