Protein Family Alignment Annotation Tool svncode

Brought to you by: carlsonjf, dcaffrey, eshuang, simonxi

Commit [r310] Maximize Restore History

Added first draft of Markers. Should be bug free and spec complete (ha!)

Authored by: pauldana 2005-12-13

Browse code at this revision

Parent: [r309]

Child: [r311]

1 2 > >> (Page 1 of 2)

changed	/trunk/pfaat/src/com/neogenesis/pfaat/AboutDialog.java
changed	/trunk/pfaat/src/com/neogenesis/pfaat/Alignment.java
changed	/trunk/pfaat/src/com/neogenesis/pfaat/AlignmentFrame.java
changed	/trunk/pfaat/src/com/neogenesis/pfaat/ColumnAnnotationComponent.java
changed	/trunk/pfaat/src/com/neogenesis/pfaat/ComparisonFrame.java
changed	/trunk/pfaat/src/com/neogenesis/pfaat/ConsensusComponent.java
changed	/trunk/pfaat/src/com/neogenesis/pfaat/ConsensusSequence.java
changed	/trunk/pfaat/src/com/neogenesis/pfaat/DisplayProperties.java
changed	/trunk/pfaat/src/com/neogenesis/pfaat/EditSeqNameDialog.java
changed	/trunk/pfaat/src/com/neogenesis/pfaat/FontManager.java
changed	/trunk/pfaat/src/com/neogenesis/pfaat/HMMERWorker.java
changed	/trunk/pfaat/src/com/neogenesis/pfaat/RulerAnnotationComponent.java
changed	/trunk/pfaat/src/com/neogenesis/pfaat/Sequence.java
added	/trunk/pfaat/src/com/neogenesis/pfaat/SequenceAnnotationChangesCompleteListener.java
added	/trunk/pfaat/src/com/neogenesis/pfaat/SequenceAnnotationListener.java
changed	/trunk/pfaat/src/com/neogenesis/pfaat/SequenceComponent.java
changed	/trunk/pfaat/src/com/neogenesis/pfaat/analysis/ConservationScores/ConservationScores.java
changed	/trunk/pfaat/src/com/neogenesis/pfaat/io/PfamLoader.java
changed	/trunk/pfaat/src/com/neogenesis/pfaat/pdb/PdbLoader.java
changed	/trunk/pfaat/src/com/neogenesis/pfaat/pdb/PdbUtil.java
changed	/trunk/pfaat/src/com/neogenesis/pfaat/seqspace/SeqSpace.java
changed	/trunk/pfaat/src/com/neogenesis/pfaat/tree/NeighborJoiningTree.java
changed	/trunk/pfaat/src/com/neogenesis/pfaat/util/AlignmentPropertyList.java
changed	/trunk/pfaat/src/com/neogenesis/pfaat/util/MultiSearchOptionsParser.java
changed	/trunk/pfaat/src/com/neogenesis/pfaat/util/PropertyListBase.java

/trunk/pfaat/src/com/neogenesis/pfaat/AboutDialog.java Diff Switch to side-by-side view

/trunk/pfaat/src/com/neogenesis/pfaat/Alignment.java Diff Switch to side-by-side view

/trunk/pfaat/src/com/neogenesis/pfaat/AlignmentFrame.java Diff Switch to side-by-side view

/trunk/pfaat/src/com/neogenesis/pfaat/ColumnAnnotationComponent.java Diff Switch to side-by-side view

/trunk/pfaat/src/com/neogenesis/pfaat/ComparisonFrame.java Diff Switch to side-by-side view

/trunk/pfaat/src/com/neogenesis/pfaat/ConsensusComponent.java Diff Switch to side-by-side view

/trunk/pfaat/src/com/neogenesis/pfaat/ConsensusSequence.java Diff Switch to side-by-side view

/trunk/pfaat/src/com/neogenesis/pfaat/DisplayProperties.java Diff Switch to side-by-side view

/trunk/pfaat/src/com/neogenesis/pfaat/EditSeqNameDialog.java Diff Switch to side-by-side view

/trunk/pfaat/src/com/neogenesis/pfaat/FontManager.java Diff Switch to side-by-side view

/trunk/pfaat/src/com/neogenesis/pfaat/HMMERWorker.java Diff Switch to side-by-side view

/trunk/pfaat/src/com/neogenesis/pfaat/RulerAnnotationComponent.java Diff Switch to side-by-side view

/trunk/pfaat/src/com/neogenesis/pfaat/Sequence.java Diff Switch to side-by-side view

/trunk/pfaat/src/com/neogenesis/pfaat/SequenceAnnotationChangesCompleteListener.java Diff Switch to side-by-side view

/trunk/pfaat/src/com/neogenesis/pfaat/SequenceAnnotationListener.java Diff Switch to side-by-side view

/trunk/pfaat/src/com/neogenesis/pfaat/SequenceComponent.java Diff Switch to side-by-side view

/trunk/pfaat/src/com/neogenesis/pfaat/analysis/ConservationScores/ConservationScores.java Diff Switch to side-by-side view

/trunk/pfaat/src/com/neogenesis/pfaat/io/PfamLoader.java Diff Switch to side-by-side view

/trunk/pfaat/src/com/neogenesis/pfaat/pdb/PdbLoader.java Diff Switch to side-by-side view

/trunk/pfaat/src/com/neogenesis/pfaat/pdb/PdbUtil.java Diff Switch to side-by-side view

/trunk/pfaat/src/com/neogenesis/pfaat/seqspace/SeqSpace.java Diff Switch to side-by-side view

/trunk/pfaat/src/com/neogenesis/pfaat/tree/NeighborJoiningTree.java Diff Switch to side-by-side view

/trunk/pfaat/src/com/neogenesis/pfaat/util/AlignmentPropertyList.java Diff Switch to side-by-side view

/trunk/pfaat/src/com/neogenesis/pfaat/util/MultiSearchOptionsParser.java Diff Switch to side-by-side view

/trunk/pfaat/src/com/neogenesis/pfaat/util/PropertyListBase.java Diff Switch to side-by-side view

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