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Second draft of "Multi Search"

this version is fucntional but lacks some polish, such as:
* saving the last query enterd when re-entering dialog
* rearranging the buttons

pauldana 2005-08-12

Browse code at this revision

Parent: [r248]

Child: [r250]

changed /trunk/pfaat/src/com/neogenesis/pfaat/Alignment.java
changed /trunk/pfaat/src/com/neogenesis/pfaat/AlignmentFrame.java
changed /trunk/pfaat/src/com/neogenesis/pfaat/AlignmentMultiSearchDialog.java
changed /trunk/pfaat/src/com/neogenesis/pfaat/AlignmentMultiSearchOptions.java
changed /trunk/pfaat/src/com/neogenesis/pfaat/AlignmentSearchOptions.java
changed /trunk/pfaat/src/com/neogenesis/pfaat/AlignmentSearchPanel.java
changed /trunk/pfaat/src/com/neogenesis/pfaat/util/MultiSearchOptionsBase.java
added /trunk/pfaat/src/com/neogenesis/pfaat/util/MultiSearchOptionsParser.java
changed /trunk/pfaat/src/com/neogenesis/pfaat/util/SearchOptionsBase.java
changed /trunk/pfaat/src/forester/tree/TreeSearchOptions.java
/trunk/pfaat/src/com/neogenesis/pfaat/Alignment.java Diff Switch to side-by-side view
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/trunk/pfaat/src/com/neogenesis/pfaat/AlignmentFrame.java Diff Switch to side-by-side view
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/trunk/pfaat/src/com/neogenesis/pfaat/AlignmentMultiSearchDialog.java Diff Switch to side-by-side view
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/trunk/pfaat/src/com/neogenesis/pfaat/AlignmentMultiSearchOptions.java Diff Switch to side-by-side view
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/trunk/pfaat/src/com/neogenesis/pfaat/AlignmentSearchOptions.java Diff Switch to side-by-side view
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/trunk/pfaat/src/com/neogenesis/pfaat/AlignmentSearchPanel.java Diff Switch to side-by-side view
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/trunk/pfaat/src/com/neogenesis/pfaat/util/MultiSearchOptionsBase.java Diff Switch to side-by-side view
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/trunk/pfaat/src/com/neogenesis/pfaat/util/MultiSearchOptionsParser.java Diff Switch to side-by-side view
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/trunk/pfaat/src/com/neogenesis/pfaat/util/SearchOptionsBase.java Diff Switch to side-by-side view
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/trunk/pfaat/src/forester/tree/TreeSearchOptions.java Diff Switch to side-by-side view
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