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Commit [r1939] Maximize Restore History
/trunk/pfaat/src/forester/tree/Branch.java
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/trunk/pfaat/src/forester/tree/Iterator.java
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/trunk/pfaat/src/forester/tree/Marker.java
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/trunk/pfaat/src/forester/tree/MarkerIterator.java
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/trunk/pfaat/src/forester/tree/Node.java
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/trunk/pfaat/src/forester/tree/PostorderTreeIterator.java
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/trunk/pfaat/src/forester/tree/PreorderTreeIterator.java
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/trunk/pfaat/src/forester/tree/StackItem.java
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/trunk/pfaat/src/forester/tree/Tree.java
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/trunk/pfaat/src/forester/tree/TreeHelper.java
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/trunk/pfaat/src/forester/tree/TreeMultiSearchOptions.java
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/trunk/pfaat/src/forester/tree/TreePropertyList.java
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/trunk/pfaat/src/forester/tree/TreeSearchOptions.java
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/trunk/pfaat/src/org/pfaat/commandline/tree/BranchRatiosForDuplicates.java Diff Switch to side-by-side view
/trunk/pfaat/src/org/pfaat/commandline/tree/GetMostAncientWithinSpeciesParalog.java Diff Switch to side-by-side view
/trunk/pfaat/src/org/pfaat/commandline/tree/GetOutgroupOfRootedTree.java Diff Switch to side-by-side view
/trunk/pfaat/src/org/pfaat/commandline/tree/NhxToTaggedUnrootedNh.java Diff Switch to side-by-side view
/trunk/pfaat/src/org/pfaat/commandline/tree/NhxToUnrootedNhForAdaptiveBranchSiteLikelihood.java Diff Switch to side-by-side view
/trunk/pfaat/src/org/pfaat/commandline/tree/NhxToUnrootedNhForRelaxDup.java Diff Switch to side-by-side view
/trunk/pfaat/src/org/pfaat/commandline/tree/PostDuplicationBranchLengths.java Diff Switch to side-by-side view
