Protein Family Alignment Annotation Tool svncode

Brought to you by: carlsonjf, dcaffrey, eshuang, simonxi

Commit [r1835] Maximize Restore History

Move to org.pfaat

Authored by: dcaffrey 2023-07-05

Browse code at this revision

Parent: [r1834]

Child: [r1836]

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changed	/trunk/pfaat/src/org/pfaat/core/msa/analysis/AlignAdjust.java
changed	/trunk/pfaat/src/org/pfaat/core/msa/analysis/ConservationScoreSimilarityMatrix.java
changed	/trunk/pfaat/src/org/pfaat/core/msa/help/Version.java
changed	/trunk/pfaat/src/org/pfaat/core/msa/io/AlignmentLoader.java
changed	/trunk/pfaat/src/org/pfaat/core/msa/io/AlignmentSaverWorker.java
changed	/trunk/pfaat/src/org/pfaat/core/msa/io/AllLoader.java
changed	/trunk/pfaat/src/org/pfaat/core/msa/io/ClustalLoader.java
changed	/trunk/pfaat/src/org/pfaat/core/msa/io/FSALoader.java
changed	/trunk/pfaat/src/org/pfaat/core/msa/io/FastaLoader.java
changed	/trunk/pfaat/src/org/pfaat/core/msa/io/HSSPLoader.java
changed	/trunk/pfaat/src/org/pfaat/core/msa/io/MSFLoader.java
changed	/trunk/pfaat/src/org/pfaat/core/msa/io/NexusLoader.java
changed	/trunk/pfaat/src/org/pfaat/core/msa/io/PfaatLoader.java
changed	/trunk/pfaat/src/org/pfaat/core/msa/io/PfamLoader.java
changed	/trunk/pfaat/src/org/pfaat/core/msa/io/PhylipLoader.java
changed	/trunk/pfaat/src/org/pfaat/core/msa/io/TabLoader.java
changed	/trunk/pfaat/src/org/pfaat/gui/msa/analysis/action/CalculateDeltaRsas.java
changed	/trunk/pfaat/src/org/pfaat/gui/msa/analysis/action/CalculateRsas.java
changed	/trunk/pfaat/src/org/pfaat/gui/msa/analysis/action/ConservationScores.java
changed	/trunk/pfaat/src/org/pfaat/gui/msa/analysis/action/ConservationScoresFrame.java
changed	/trunk/pfaat/src/org/pfaat/gui/msa/analysis/action/ConservationScoresOptionsChooser.java
changed	/trunk/pfaat/src/org/pfaat/gui/msa/analysis/action/Correlate.java
changed	/trunk/pfaat/src/org/pfaat/gui/msa/analysis/action/CorrelateFrame.java
changed	/trunk/pfaat/src/org/pfaat/gui/msa/analysis/action/CorrelateManager.java
changed	/trunk/pfaat/src/org/pfaat/gui/msa/analysis/action/CorrelateOptionsChooser.java

/trunk/pfaat/src/org/pfaat/core/msa/analysis/AlignAdjust.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/core/msa/analysis/ConservationScoreSimilarityMatrix.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/core/msa/help/Version.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/core/msa/io/AlignmentLoader.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/core/msa/io/AlignmentSaverWorker.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/core/msa/io/AllLoader.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/core/msa/io/ClustalLoader.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/core/msa/io/FSALoader.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/core/msa/io/FastaLoader.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/core/msa/io/HSSPLoader.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/core/msa/io/MSFLoader.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/core/msa/io/NexusLoader.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/core/msa/io/PfaatLoader.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/core/msa/io/PfamLoader.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/core/msa/io/PhylipLoader.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/core/msa/io/TabLoader.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/gui/msa/analysis/action/CalculateDeltaRsas.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/gui/msa/analysis/action/CalculateRsas.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/gui/msa/analysis/action/ConservationScores.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/gui/msa/analysis/action/ConservationScoresFrame.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/gui/msa/analysis/action/ConservationScoresOptionsChooser.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/gui/msa/analysis/action/Correlate.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/gui/msa/analysis/action/CorrelateFrame.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/gui/msa/analysis/action/CorrelateManager.java Diff Switch to side-by-side view

/trunk/pfaat/src/org/pfaat/gui/msa/analysis/action/CorrelateOptionsChooser.java Diff Switch to side-by-side view

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