Protein Family Alignment Annotation Tool svncode

Brought to you by: carlsonjf, dcaffrey, eshuang, simonxi

svncode Commit Log

Commit	Date
[r1330] by dcaffrey better handling of missing connects	2011-09-20 20:30:24	Tree
[r1329] by adamwespiser made change to residue propensity adjumentment: all score are multipled by 1 over highest score to extend range from 0 to 1.	2011-09-01 16:20:43	Tree
[r1328] by adamwespiser GetPatches.java has been modified to allow for amino acid propensity. Specifying the "-P" flag on the command line will calculate amino acid score for B%B as the multiple of conservation score and percent probability of finding amino acid of type X in an interface. The probabilities were calculated using the paralog dataset.	2011-08-31 16:50:48	Tree
[r1327] by adamwespiser "added support for percent ID cutoff"	2011-07-11 14:48:56	Tree
[r1326] by adamwespiser added polar RSA	2011-07-06 20:20:39	Tree
[r1325] by adamwespiser updated GetResidueProperties	2011-06-29 20:17:55	Tree
[r1324] by adamwespiser exports a csv file of residue properties one sequence in a pfaat file.	2011-06-29 20:15:36	Tree
[r1323] by dcaffrey * empty log message *	2011-06-02 19:40:12	Tree
[r1322] by dcaffrey * empty log message *	2011-06-02 17:39:59	Tree
[r1321] by dcaffrey fix and refactor conservation scores / colors	2011-05-27 04:31:41	Tree

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