[OWLAPI-developer] Problem with parsing OWL ontologies

[Reul, Q. H. <q....@ab...>]

Hi,

I have a problem parsing the attached ontology (see error below). The OWL API complains about the syntax, but I have validated using the W3C RDF Validator [1] and it works fine. Does anyone know what could be the problem with it.

Cheers,

Quentin

[1] http://www.w3.org/RDF/Validator/

org.semanticweb.owl.io.UnparsableOntologyException: Problem parsing file:////Users/qreul/Documents/workspace/OntoMap/output/anatomy_token.owl
Could not parse ontology.  Either a suitable parser could not be found, or parsing failed.  See parser logs below for explanation.
The following parsers were tried.
1) org.coode.owl.rdfxml.parser.RDFXMLParser
2) org.coode.owl.owlxmlparser.OWLXMLParser
3) org.coode.owl.functionalparser.OWLFunctionalSyntaxOWLParser
4) uk.ac.manchester.cs.owl.turtle.parser.TurtleOntologyParser
5) org.coode.manchesterowlsyntax.ManchesterOWLSyntaxOntologyParser
6) org.coode.obo.parser.OWLOBOParser
7) de.uulm.ecs.ai.owl.krssparser.KRSS2OWLParser


Detailed logs:
--------------------------------------------------------------------------------
Parser class: org.coode.owl.rdfxml.parser.RDFXMLParser
org.semanticweb.owl.io.OWLOntologyCreationIOException: Server returned HTTP response code: 503 for URL: http://mouse.owl

--------------------------------------------------------------------------------
Parser class: org.coode.owl.owlxmlparser.OWLXMLParser
(Current element RDF

--------------------------------------------------------------------------------
Parser class: org.coode.owl.functionalparser.OWLFunctionalSyntaxOWLParser
org.coode.owl.functionalparser.ParseException: Encountered "<" at line 1, column 1.
Was expecting one of:
    "Ontology" ...
    "Namespace" ...
     (Line 0)

--------------------------------------------------------------------------------
Parser class: uk.ac.manchester.cs.owl.turtle.parser.TurtleOntologyParser
java.net.URISyntaxException: Illegal character in query at index 4: ?xml version="1.0" encoding="UTF-8"?

--------------------------------------------------------------------------------
Parser class: org.coode.manchesterowlsyntax.ManchesterOWLSyntaxOntologyParser
org.semanticweb.owl.expression.ParserException: Encountered <?xml at line 0 column 0. Expected one of:
        ValuePartition:
        Individual:
        DataProperty:
        Imports:
        ObjectProperty:
        Class:


--------------------------------------------------------------------------------
Parser class: org.coode.obo.parser.OWLOBOParser
org.coode.obo.parser.ParseException: Encountered "<rdf" at line 2, column 1.
Was expecting:
    "\n" ...


--------------------------------------------------------------------------------
Parser class: de.uulm.ecs.ai.owl.krssparser.KRSS2OWLParser
de.uulm.ecs.ai.owl.krssparser.ParseException: Encountered "<?xml version=\"1.0\" encoding=\"UTF-8\"?>" at line 1, column 1.
Was expecting one of:
    <EOF>
    "(" ...
    "end-tbox" ...
    "end-abox" ...


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