#136 Many models in the optflux model collection are invalid SBML

[Matthias König]

Hi all,
I checked the models in the SBML optflux model collection available here
https://github.com/biosustain/memote-meta-models
from originally here
https://darwin.di.uminho.pt/models (certificates are expired)

Many of the models have invalid SBML ids
- iCAC490: missing/incorrect reaction ids
- iCyp752: missing/incorrect reaction ids
- iHZ565: metabolite ids, reaction ids, ...
- iCyn731: reaction ids
- iCyc792: reaction ids
- iCyj826: reaction ids
- iRP911: ids
- iCyp752: ids
- iHZ565: ids
- iIB700: ids
- iMA945: ids

Some are incorrect due to other issues
- iMZ1055: problems with local parameter
- iBT721: empty lists
- iJP962: misc errors
- iMH805_775: incorrect notes

Find a list of all problems attached (optflux-errors.json).

Best Matthias

Matthias König, PhD.
Junior Group Leader LiSyM - Systems Medicine of the Liver
Humboldt Universität zu Berlin, Institute of Biology, Institute for Theoretical Biology
https://livermetabolism.com