opengrads-devel

[Opengrads-devel] Shared Library Error Prevents OpenGrADS 2.0.2 From Starting

[Devin B. <db...@ws...>]

Hi there,

I'm attempting to install OpenGrads 2.0.2.oga.2 on our CentOS 5 machine and
am running into some difficulty. I downloaded
the grads-2.0.2.oga.2-bundle-i686-pc-linux-gnu.tar.gz package and untarred
it. When I first run "grads" from this, I get 7 errors, 3 that version of
GLIBCX aren't found (in  /usr/lib/libstdc++.so.6) and 4 that versions of
GLIBC aren't found (in /lib/libc.so.6). (I can provide the exact error
output if that is helpful.)

To remedy, I tried to copy those libraries from those included in the libs
directory to the gex directory, as suggested in the documentation. After
doing that, I now get this error:

/opt/opengrads2.0.2/Linux/Versions/2.0.2.oga.2/i686/grads: error while
loading shared libraries:
/opt/opengrads2.0.2/Linux/Versions/2.0.2.oga.2/i686/gex/libc.so.6:
unexpected PLT reloc type 0x2a


Interestingly enough, if I download the previous GrADS release
(2.0.1.oga.1), everything works fine if I simply just extract contents of
the tarball. This happens with both the oga.1 and oga.2 releases of version
2.0.2. I did notice that there's a bit of a difference in filenames between
2.0.1 and 2.0.2 - could this be part of the difference?

grads-2.0.1.oga.1-bundle-i686-glibc2.5-linux-gnu.tar.gz
-versus-
grads-2.0.2.oga.2-bundle-i686-pc-linux-gnu.tar.gz

Does this seem to be some sort of issue with the distribution or does it
seem more like a problem on my end?

Thanks!

Sincerely,
Devin Boyer
Software Engineer, WSI Corp.

Re: [Opengrads-devel] Shared Library Error Prevents OpenGrADS 2.0.2 From Starting

[Mike F. <mfi...@gm...>]

hi Devin,

my guess is a conflict with your distro...have you tried building from source?  CentOS5 is a bit dated...  sorry I can't be more helpful

best /R Mike

On 2014-07-01, 16:02 , Devin Boyer wrote:
> Hi there,
>
> I'm attempting to install OpenGrads 2.0.2.oga.2 on our CentOS 5 machine and am running into some difficulty. I downloaded 
> the grads-2.0.2.oga.2-bundle-i686-pc-linux-gnu.tar.gz package and untarred it. When I first run "grads" from this, I get 7 errors, 3 that version of 
> GLIBCX aren't found (in  /usr/lib/libstdc++.so.6) and 4 that versions of GLIBC aren't found (in /lib/libc.so.6). (I can provide the exact error 
> output if that is helpful.)
>
> To remedy, I tried to copy those libraries from those included in the libs directory to the gex directory, as suggested in the documentation. After 
> doing that, I now get this error:
>
> /opt/opengrads2.0.2/Linux/Versions/2.0.2.oga.2/i686/grads: error while loading shared libraries: 
> /opt/opengrads2.0.2/Linux/Versions/2.0.2.oga.2/i686/gex/libc.so.6: unexpected PLT reloc type 0x2a
>
>
> Interestingly enough, if I download the previous GrADS release (2.0.1.oga.1), everything works fine if I simply just extract contents of the 
> tarball. This happens with both the oga.1 and oga.2 releases of version 2.0.2. I did notice that there's a bit of a difference in filenames between 
> 2.0.1 and 2.0.2 - could this be part of the difference?
>
> grads-2.0.1.oga.1-bundle-i686-glibc2.5-linux-gnu.tar.gz
> -versus-
> grads-2.0.2.oga.2-bundle-i686-pc-linux-gnu.tar.gz
>
> Does this seem to be some sort of issue with the distribution or does it seem more like a problem on my end?
>
> Thanks!
>
> Sincerely,
> Devin Boyer
> Software Engineer, WSI Corp.
>
>
> ------------------------------------------------------------------------------
> Open source business process management suite built on Java and Eclipse
> Turn processes into business applications with Bonita BPM Community Edition
> Quickly connect people, data, and systems into organized workflows
> Winner of BOSSIE, CODIE, OW2 and Gartner awards
> http://p.sf.net/sfu/Bonitasoft
>
>
> _______________________________________________
> Opengrads-devel mailing list
> Ope...@li...
> https://lists.sourceforge.net/lists/listinfo/opengrads-devel

Re: [Opengrads-devel] Shared Library Error Prevents OpenGrADS 2.0.2 From Starting

[Arlindo da S. <da...@al...>]

On Tue, Jul 1, 2014 at 12:02 PM, Devin Boyer <db...@ws...> wrote:

> Hi there,
>
> I'm attempting to install OpenGrads 2.0.2.oga.2 on our CentOS 5 machine
> and am running into some difficulty. I downloaded
> the grads-2.0.2.oga.2-bundle-i686-pc-linux-gnu.tar.gz package and untarred
> it. When I first run "grads" from this, I get 7 errors, 3 that version of
> GLIBCX aren't found (in  /usr/lib/libstdc++.so.6) and 4 that versions of
> GLIBC aren't found (in /lib/libc.so.6). (I can provide the exact error
> output if that is helpful.)
>
> To remedy, I tried to copy those libraries from those included in the libs
> directory to the gex directory, as suggested in the documentation.
>

As mentioned in the documentation, add only one library at a time. If it
complained about "libstdc++.so.6" then add this one and see what happens.
Do not not add "libc.so.6" unless you have a reason to do so.


> After doing that, I now get this error:
>
> /opt/opengrads2.0.2/Linux/Versions/2.0.2.oga.2/i686/grads: error while
> loading shared libraries:
> /opt/opengrads2.0.2/Linux/Versions/2.0.2.oga.2/i686/gex/libc.so.6:
> unexpected PLT reloc type 0x2a
>
>
Try removing libc.so.6 from gex/ and see what happens (but keep
libstc++.so.6). I know it is counter intuitive.


>
> Interestingly enough, if I download the previous GrADS release
> (2.0.1.oga.1), everything works fine if I simply just extract contents of
> the tarball.
>

Release 2.0.1 was built in 2011 and it is possible that I has running
CentOS 5 back then. My i686 build machine is a recent Ubuntu release.


> This happens with both the oga.1 and oga.2 releases of version 2.0.2. I
> did notice that there's a bit of a difference in filenames between 2.0.1
> and 2.0.2 - could this be part of the difference?
>
> grads-2.0.1.oga.1-bundle-i686-glibc2.5-linux-gnu.tar.gz
> -versus-
> grads-2.0.2.oga.2-bundle-i686-pc-linux-gnu.tar.gz
>


I was including the libc version  by hand just for reference and I forgot
to do it this time; this should not be an issue.


>
> Does this seem to be some sort of issue with the distribution or does it
> seem more like a problem on my end?
>
>
Try removing libc.so.6 from gex/ and let me know what it happens. If it
still does not work we will need to perform a build on your machine. Please
post you reply on gradsusr in order to provide a searcheable reference for
this particular issue.


     Arlindo


-- 
Arlindo da Silva
*da...@al... <da...@al...>*

Re: [Opengrads-devel] Shared Library Error Prevents OpenGrADS 2.0.2 From Starting

[Devin B. <db...@ws...>]

Hi Arlindo,

Thanks for the reply. Unfortunately, just adding "libstdc++.so.6" didn't
work (it eliminated those errors, but the ones pointing to libc.so.6
remain). If I only add the "libc.so.6" library to gex and don't include
"libstdc++.so.6", I get the errors referring to that library (like
"/usr/lib/libstdc++.so.6:
version `GLIBCXX_3.4.11' not found") only, with no complaints on behalf of
libc.so.6. Adding both nets you the "unexpected PLT reloc" error for
"libc.so.6".

Those details are probably (hopefully) water under the bridge if I am able
to build from source. Unfortunately I see this morning the OpenGrADS wiki
is down. Are there instructions elsewhere, by chance?

Thanks again,
Devin


On Wed, Jul 2, 2014 at 10:29 AM, Arlindo da Silva <da...@al...>
wrote:

> On Tue, Jul 1, 2014 at 12:02 PM, Devin Boyer <db...@ws...> wrote:
>
>> Hi there,
>>
>> I'm attempting to install OpenGrads 2.0.2.oga.2 on our CentOS 5 machine
>> and am running into some difficulty. I downloaded
>> the grads-2.0.2.oga.2-bundle-i686-pc-linux-gnu.tar.gz package and untarred
>> it. When I first run "grads" from this, I get 7 errors, 3 that version of
>> GLIBCX aren't found (in  /usr/lib/libstdc++.so.6) and 4 that versions of
>> GLIBC aren't found (in /lib/libc.so.6). (I can provide the exact error
>> output if that is helpful.)
>>
>> To remedy, I tried to copy those libraries from those included in the
>> libs directory to the gex directory, as suggested in the documentation.
>>
>
> As mentioned in the documentation, add only one library at a time. If it
> complained about "libstdc++.so.6" then add this one and see what happens.
> Do not not add "libc.so.6" unless you have a reason to do so.
>
>
>> After doing that, I now get this error:
>>
>> /opt/opengrads2.0.2/Linux/Versions/2.0.2.oga.2/i686/grads: error while
>> loading shared libraries:
>> /opt/opengrads2.0.2/Linux/Versions/2.0.2.oga.2/i686/gex/libc.so.6:
>> unexpected PLT reloc type 0x2a
>>
>>
> Try removing libc.so.6 from gex/ and see what happens (but keep
> libstc++.so.6). I know it is counter intuitive.
>
>
>>
>> Interestingly enough, if I download the previous GrADS release
>> (2.0.1.oga.1), everything works fine if I simply just extract contents of
>> the tarball.
>>
>
> Release 2.0.1 was built in 2011 and it is possible that I has running
> CentOS 5 back then. My i686 build machine is a recent Ubuntu release.
>
>
>> This happens with both the oga.1 and oga.2 releases of version 2.0.2. I
>> did notice that there's a bit of a difference in filenames between 2.0.1
>> and 2.0.2 - could this be part of the difference?
>>
>> grads-2.0.1.oga.1-bundle-i686-glibc2.5-linux-gnu.tar.gz
>> -versus-
>> grads-2.0.2.oga.2-bundle-i686-pc-linux-gnu.tar.gz
>>
>
>
> I was including the libc version  by hand just for reference and I forgot
> to do it this time; this should not be an issue.
>
>
>>
>> Does this seem to be some sort of issue with the distribution or does it
>> seem more like a problem on my end?
>>
>>
> Try removing libc.so.6 from gex/ and let me know what it happens. If it
> still does not work we will need to perform a build on your machine. Please
> post you reply on gradsusr in order to provide a searcheable reference for
> this particular issue.
>
>
>      Arlindo
>
>
> --
> Arlindo da Silva
> *da...@al... <da...@al...>*
>
>
> ------------------------------------------------------------------------------
> Open source business process management suite built on Java and Eclipse
> Turn processes into business applications with Bonita BPM Community Edition
> Quickly connect people, data, and systems into organized workflows
> Winner of BOSSIE, CODIE, OW2 and Gartner awards
> http://p.sf.net/sfu/Bonitasoft
> _______________________________________________
> Opengrads-devel mailing list
> Ope...@li...
> https://lists.sourceforge.net/lists/listinfo/opengrads-devel
>
>

Re: [Opengrads-devel] Shared Library Error Prevents OpenGrADS 2.0.2 From Starting

[Arlindo da S. <da...@al...>]

On Wed, Jul 2, 2014 at 10:48 AM, Devin Boyer <db...@ws...> wrote:

> Hi Arlindo,
>
> Thanks for the reply. Unfortunately, just adding "libstdc++.so.6" didn't
> work (it eliminated those errors, but the ones pointing to libc.so.6
> remain). If I only add the "libc.so.6" library to gex and don't include
> "libstdc++.so.6", I get the errors referring to that library (like "/usr/lib/libstdc++.so.6:
> version `GLIBCXX_3.4.11' not found") only, with no complaints on behalf of
> libc.so.6. Adding both nets you the "unexpected PLT reloc" error for
> "libc.so.6".
>
>
GrADS binaries are very portable across Linux distributions provided that
the libc is compatible. In the end, changes in libc is what get us. That is
the reason why I had started labeling the binaries with the libc version.


> Those details are probably (hopefully) water under the bridge if I am able
> to build from source. Unfortunately I see this morning the OpenGrADS wiki
> is down. Are there instructions elsewhere, by chance?
>
>
The wiki is temporarily down due to a PHP upgrade, we hope to have it fixed
soon.

As for the build, download the source tarball from

   https://sourceforge.net/projects/opengrads/files/grads2/2.0.2.oga.2

(or the latest 2.1.a2.oga.1 if you wish.) Untar and read the included
"BUILD" file.  As for dependencies, I'd start with the latest pre-compiled
supplibs 2.3.1,

     https://sourceforge.net/projects/opengrads/files/supplibs/2.3.1/

and see if you can get away with it (there is a good chance that will
work). Otherwise, build the supplibs yourself from the source tarball in
this directory (see file INSTALL).

     Good Luck,

        Arlindo




> Thanks again,
> Devin
>
>
> On Wed, Jul 2, 2014 at 10:29 AM, Arlindo da Silva <da...@al...>
> wrote:
>
>> On Tue, Jul 1, 2014 at 12:02 PM, Devin Boyer <db...@ws...> wrote:
>>
>>> Hi there,
>>>
>>> I'm attempting to install OpenGrads 2.0.2.oga.2 on our CentOS 5 machine
>>> and am running into some difficulty. I downloaded
>>> the grads-2.0.2.oga.2-bundle-i686-pc-linux-gnu.tar.gz package and untarred
>>> it. When I first run "grads" from this, I get 7 errors, 3 that version of
>>> GLIBCX aren't found (in  /usr/lib/libstdc++.so.6) and 4 that versions of
>>> GLIBC aren't found (in /lib/libc.so.6). (I can provide the exact error
>>> output if that is helpful.)
>>>
>>> To remedy, I tried to copy those libraries from those included in the
>>> libs directory to the gex directory, as suggested in the documentation.
>>>
>>
>> As mentioned in the documentation, add only one library at a time. If it
>> complained about "libstdc++.so.6" then add this one and see what happens.
>> Do not not add "libc.so.6" unless you have a reason to do so.
>>
>>
>>> After doing that, I now get this error:
>>>
>>> /opt/opengrads2.0.2/Linux/Versions/2.0.2.oga.2/i686/grads: error while
>>> loading shared libraries:
>>> /opt/opengrads2.0.2/Linux/Versions/2.0.2.oga.2/i686/gex/libc.so.6:
>>> unexpected PLT reloc type 0x2a
>>>
>>>
>> Try removing libc.so.6 from gex/ and see what happens (but keep
>> libstc++.so.6). I know it is counter intuitive.
>>
>>
>>>
>>> Interestingly enough, if I download the previous GrADS release
>>> (2.0.1.oga.1), everything works fine if I simply just extract contents of
>>> the tarball.
>>>
>>
>> Release 2.0.1 was built in 2011 and it is possible that I has running
>> CentOS 5 back then. My i686 build machine is a recent Ubuntu release.
>>
>>
>>> This happens with both the oga.1 and oga.2 releases of version 2.0.2. I
>>> did notice that there's a bit of a difference in filenames between 2.0.1
>>> and 2.0.2 - could this be part of the difference?
>>>
>>> grads-2.0.1.oga.1-bundle-i686-glibc2.5-linux-gnu.tar.gz
>>> -versus-
>>> grads-2.0.2.oga.2-bundle-i686-pc-linux-gnu.tar.gz
>>>
>>
>>
>>  I was including the libc version  by hand just for reference and I
>> forgot to do it this time; this should not be an issue.
>>
>>
>>>
>>> Does this seem to be some sort of issue with the distribution or does it
>>> seem more like a problem on my end?
>>>
>>>
>> Try removing libc.so.6 from gex/ and let me know what it happens. If it
>> still does not work we will need to perform a build on your machine. Please
>> post you reply on gradsusr in order to provide a searcheable reference for
>> this particular issue.
>>
>>
>>      Arlindo
>>
>>
>> --
>> Arlindo da Silva
>> *da...@al... <da...@al...>*
>>
>>
>> ------------------------------------------------------------------------------
>> Open source business process management suite built on Java and Eclipse
>> Turn processes into business applications with Bonita BPM Community
>> Edition
>> Quickly connect people, data, and systems into organized workflows
>> Winner of BOSSIE, CODIE, OW2 and Gartner awards
>> http://p.sf.net/sfu/Bonitasoft
>> _______________________________________________
>> Opengrads-devel mailing list
>> Ope...@li...
>> https://lists.sourceforge.net/lists/listinfo/opengrads-devel
>>
>>
>
>
> ------------------------------------------------------------------------------
> Open source business process management suite built on Java and Eclipse
> Turn processes into business applications with Bonita BPM Community Edition
> Quickly connect people, data, and systems into organized workflows
> Winner of BOSSIE, CODIE, OW2 and Gartner awards
> http://p.sf.net/sfu/Bonitasoft
> _______________________________________________
> Opengrads-devel mailing list
> Ope...@li...
> https://lists.sourceforge.net/lists/listinfo/opengrads-devel
>
>


-- 
Arlindo da Silva
*da...@al... <da...@al...>*