Re: [Open Babel] pdb -> mol2 conversion with halides

[Geoff H. <hut...@ch...>]

> Also is there any way to have more than one molecule in the PDB file and
> to convert the lot to mol2 with one command. The orginal babel managed
> this but I can not seem to get openbabel to recognise more than one
> molecule per file.

Yes, it's a limitation at the moment that will be fixed before "Babel 2.0"
is released. As it stands, there is some functionality in the original
Babel that is not in Open Babel. More development help, of course, is
always appreciated.

--
-Geoff Hutchison		<hut...@ch...>
Marks/Ratner Groups		(847) 491-3295
Northwestern Chemistry		<http://www.chem.northwestern.edu>