From: Geoffrey H. <ge...@ge...> - 2009-10-26 18:18:52
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> One more thing, why do we have two different codes obprop and > obrotamer, is it possible to include print rotatable bonds by > running obprop , can we do that. The definition of rotatable bonds is slightly different. The obprop program uses a general rule -- think of it as indicating the approximate number of rotatable bonds (based on cheminformatics). The obrotamer program actually generates rotamers/conformers. So it has a set of patterns for what bonds can be rotated. Hope that helps, -Geoff |