Re: [Open-ms-general] Java is needed to run MS-GF+

[Lars N. <l....@me...>]

Hi Hendrik and Mike,

this issue might be related #1764 [1]. I guess both MS-GF+ itself and the MSGFPlusAdapter will run alright from the command line. Unfortunately, #1941 [2] did not resolve the issue.
Cheers

Lars

[1] https://github.com/OpenMS/OpenMS/issues/1764
[2] https://github.com/OpenMS/OpenMS/pull/1941


> On 22 Jul 2016, at 12:40, Hendrik Weisser <hw...@sa...> wrote:
> 
> Hi!
> 
> I think we had some problems in the past that were caused by Macs 
> exposing different environments on the command line and for apps (like 
> TOPPAS).
> 
> Can you check if you can run the MSGFPlusAdapter tool from the command 
> line with an example file? I.e. does it work there or do you get the 
> same Java error?
> 
> 
> Cheers
> 
> Hendrik
> 
> 
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