[Opaltoolkit-users] Babel Shell Script Input - NBCR Opal WSDL

[Derek L. <der...@si...>]

Thank you Nadya – your explanation was perfectly clear. OpenBabel WSDL services are now working for me without any errors.

OpenBabel.sh shell requires the addition of positional arguments for parsing the argument string.

OpenBabel argument:
-ipdb APE1inhibitor.pdb –opdbqt APE1out.pdbqt

OpenBabel.sh shell argument with positional arguments:
-iformat -ipdb -ifile APE1inhibitor.pdb -oformat -opdbqt -ofile APE1out.pdbqt