Activity for ONDEX Suite
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AjitPS committed [r19438]
json export new concepts added
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Disease concept visual attributed edited
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Marco Brandizi committed [r19436]
JSON exporter plugin for KnetMaps updated
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Removing ondex-view-plugin, MetaDataEditor.
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Disabling outdated plugin-rd-ws.
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Git test commit
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ondex-all nbactions to launch
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cyJS plugin new concepts to visualize added
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More changes to exclude the 'chemical' module.
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Outdated module 'chemical' excluded from build....
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Exluding probably wrong version of DefConst
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Adding support to multiple ONDEX attritbutes. M...
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Monika Mistry committed [r19426]
only uniprot/SGD accessions added to concepts
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only gene accessions added to gene concepts
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updated
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Testing SF permission change.
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SGD/Uniprot accessions
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Ensembl gene accessions ambiguous
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protein accessions ambiguous, gene accessions n...
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More clean-up of version from dependencies.
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Parameterising ondex module dependency version.
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Parameterising ONDEX POM dependencies.
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Minor changes to the POM.
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Removing all <version> from POMs, when this is ...
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Moving to Java 8. Cleaning up POMs.
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Another GH/SVN test.
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Testing GH-SVN integration.
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Testing Git integration.
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Preparing github migration.
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Test with git-svn.
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Testing svn2git.
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Very minor improvement on comments.
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geneCName duplication issue fixed, eg,GA20ox1A
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Adding ignores
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Fixing the scripting engine that cannot be run ...
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Fixing bug that prevents PVALUE attributes to b...
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Adding Javascript plug-in.
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Adding JavaScript plug-in.
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Minor improvements.
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Element start-line added to the schema. Tests a...
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tab-parser-2 added to plugins shipped with onde...
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Adding tab-parser-2 as plugin to ONDEX installer.
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Making GraphEntityPrototype public.
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Minor improvement to the module's POM, tab-pars...
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Minor improvements to the top POM.
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A new tabular file parser plug-in, first commit.
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removed sysout println
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paralogGroup relations
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removed sysout println
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changed TAIR (".") ambiguous data sources
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Added SGD accession for yeast
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edits
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transformer_uniprot
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orthoxml0_3 new_changes_for_OMA_data
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unknown datasources
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xref omitted in genericobo parser
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Added paralog relations. Split protId
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Just a credendials test.
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Just a credentials test.
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e_fetch WS issue fix
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e_fetch WS url changed from http to https to av...
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doc_updated
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uniprot parser modified to omit extra accession...
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cyjs_json parser cleanup
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cyjs_json parser cleanup
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cyjs_json parser cleanup
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jsonIO parser updated in trunk
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jsonIO parser updated
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cyjs_json parser updated- AddConceptNodeInfo cl...
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cyjs_json parser updated- visual concept attrib...
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cyjs_json parser updated- visual concept attrib...
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updated_160816_tested_for_Wheat_Gene-Protein
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merged changes from trunk_sequence
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testCommit_160816
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Keywan committed [r19364]
small fix to attLocation
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Only parse primary accession
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Tidy up the code
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Parse biotype and add as description
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Create pub_in relations to Publication concepts
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remote tags
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Major change: Not store AA sequence to reduce s...
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Set EC tags if parameter is set
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Test commit
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fastagff_parser_updated_for_Wheat_gff3
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gff3_parser_Wheat_tested
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changed chromosome from Integer to String in on...
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changed chromosome from Integer to String in on...
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fastagff_Parser_geneDescription_removed_for_now...
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fastagff_Parser_Wheat_ChrName_Location_Aug2016
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fastagff_Parser_updated_forWheat_chromosomes_Au...
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fastagff_Parser_pom_edited_Aug2016
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fastagff_Parser_newCHanges_Aug2016
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New orthoXML 0.3 plugin _17-05-2016
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orthoXML_2_newCode_and_testFiles
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orthoXML_fixes
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new branch to fix and extend orthoXML parser (p...
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uniprot_parser_disease_fixes
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Uniprot parser (local) work in progress, change...
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sequence module copied with uniprot parser chan...
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jsonIO_Exporter_evidenceTypes_testOXL
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