Framework for text mining, data integration and data analysis. Keywords: ontology and graph alignment, relation mining, warehouse, semantic database integration, bioinformatics, systems biology, microarray, Java.

Project Samples

OVTK2 displaying two protein-protein interaction networks. FH8 protein with manual and text mining based GO annotations Cellulose biosynthesis pathway and gene expression data Filtering a PPI network according to confidence values Protein annotated to the Gene Ontology

Project Activity

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Categories

Search Engines, Bio-Informatics, Information Analysis, Data Analytics, Data Integration

License

GNU General Public License version 2.0 (GPLv2)

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Additional Project Details

Languages

English

Intended Audience

Developers, Healthcare Industry, Information Technology, Science/Research

User Interface

Command-line, Java Swing, Web-based

Programming Language

Java

Database Environment

Berkeley/Sleepycat/Gdbm (DBM)

Related Categories

Java Search Engines, Java Bio-Informatics Software, Java Information Analysis Software, Java Data Analytics Tool, Java Data Integration Tool

Registered

2004-06-21
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