Re: [Omnigene-devel] Help needed to try OmniDas examples

[Brian G. <gi...@ha...>]

If you do get the sources from CVS please do a cvs update right afterward
like so:

	cvs update -d -P -A


	This will prune all the irrelevant directories (of which there are
many)..

				-b

-----------------------
Brian Gilman <gi...@ge...>
Sr. Software Engineer MIT/Whitehead Inst. Center for Genome Research
One Kendall Square, Bldg. 300 / Cambridge, MA 02139-1561 USA
phone +1 617  252 1069 / fax +1 617 252 1902


On Wed, 13 Feb 2002, Brian Gilman wrote:

> Hello Thomas,
> 
> 
> 	have you tried getting the stuff out of CVS and building from
> there??
> 
> 				-b
> 
> -----------------------
> Brian Gilman <gi...@ge...>
> Sr. Software Engineer MIT/Whitehead Inst. Center for Genome Research
> One Kendall Square, Bldg. 300 / Cambridge, MA 02139-1561 USA
> phone +1 617  252 1069 / fax +1 617 252 1902
> 
> 
> On Wed, 13 Feb 2002, Thomas Gaudin wrote:
> 
> > Brian Gilman wrote:
> > 
> > > Hmmm...
> > > 
> > > 	I've found the error...Looks like there's a problem with the
> > > omnidas-examples jar file...ie *there's no example classes in there!!* 
> > > 
> > > 	Set your classpath to <install_dir>/omnigene/ and everything
> > > should run.
> > > 
> > > 				-B
> > >
> > 
> > 
> > That's what I did, I am sure that EnsemblDASExample.class is in my 
> > classpath (my jvm doesn't complain that she doesn't find the main method),
> > 
> > Something I also noticed is that the url supplyed in 
> > EnsemblDASExample.java (http://servlet.sanger.ac.uk:8080/das) doesn't 
> > exist (or has at least a problem since I get a connection time out...).
> > 
> > For that reason I tryed the commented url 
> > (http://genome-test.cse.ucsc.edu/cgi-bin/das) and put some debug stuff 
> > in the code : it seems that query.doDASQuery() never ends up...
> > 
> > Any idea ?
> > 
> > thanks,
> > 
> > Thomas
> > 
> > 
> > 
> > _______________________________________________
> > Omnigene-devel mailing list
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> > 
> 
> 
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