Re: [odin-devel] questions on IDEA integration
develop, simulate and run magnetic resonance sequences
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From: Thies J. <th...@jo...> - 2009-04-08 13:24:32
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On Mittwoch, 8. April 2009, Lazar Fleysher wrote: > Hello everybody, > > I have finally compiled odinepi for IDEA and now I see that the > user-interface reports > unreal frequency-encode resolution. My understanding is that I can > safely ignore this? > Am I right, or I made a mistake? You can ignore this. This probably because IDEA does not know about the oversampling in ODIN... > Aslo, if I want to make several average, I guess I can use repetitions > counter and than > add the images myself. The question I have if ODIN produces complex > images so I can > average later? Is there a switch for the iceprogram to do it > automatically. (I did not look at > ice yet, sorry for this stupidity) There are two possibilities in ODIN for averaging: 1) Use the reco index 'average' to average the complex signal data before reconstruction. Please refer to the odinonep.cpp sequence how to do this. 2) Sum up the reconstructed repetitions yourself (Use the -sp switch of odinreco to store the phase) or use the "repcoll | repsum" functors of Odin (cf. tj_verve.cpp sequence). Best wishes, Thies |