[Obo-svn-commit] SF.net SVN: obo: [381] phenote/trunk/doc/phenote-website/content/howtos/ customize.shtml

[<nl...@us...>]

Revision: 381
          http://svn.sourceforge.net/obo/?rev=381&view=rev
Author:   nlw
Date:     2007-02-22 11:50:38 -0800 (Thu, 22 Feb 2007)

Log Message:
-----------
little changes

Modified Paths:
--------------
    phenote/trunk/doc/phenote-website/content/howtos/customize.shtml

Modified: phenote/trunk/doc/phenote-website/content/howtos/customize.shtml
===================================================================
--- phenote/trunk/doc/phenote-website/content/howtos/customize.shtml	2007-02-22 19:33:51 UTC (rev 380)
+++ phenote/trunk/doc/phenote-website/content/howtos/customize.shtml	2007-02-22 19:50:38 UTC (rev 381)
@@ -17,11 +17,7 @@
 
 <h2>The basics</h2>
 
-<p>Make sure you've already tried running the webstart edition of phenote.  Running this once should leave a directory on your computer called ".phenote".  On a PC this will be under C:/Documents and Settings/UserName/.phenote.  On a mac it will be in your home dir (easiest to get to via a terminal window).
-</p>
-
-<h2>Location of your configuation file</h2>
-<p> The configuration files used by Phenote are located in the ".phenote/conf" directory.
+<p>Make sure you've already tried running the webstart edition of phenote.  Running this once should leave a directory on your computer called ".phenote".  
   <ul>
     <li>On a Mac, you will find this located under the MacintoshHD:Users:YourAccount directory, although you probably will not see it in a "finder" window.  You do have access to it if you run a "terminal" window.  It will be located in your user directory. 
     </li>
@@ -29,6 +25,10 @@
     </li>
   </ul>
 </p>
+
+<h2>Location of your configuation file</h2>
+<p> The configuration files used by Phenote are located in the ".phenote/conf" directory.
+</p>
 <p>
 Within this directory you can store any number of configuration files.  The default files that come with the webstart versions are named "flybase.cfg", "zfin-standalone.cfg", or "human.cfg", depending on which version you've used in the past.  Any file you create/modify should be placed in this directory.
 </p>
@@ -46,14 +46,10 @@
 Then, you should be able to start phenote with the same webstart link as before, but it should load with this new configuration.  you can also start it by double-clicking on the java icon that downloaded to your desktop called "phenote-zfin.jnlp" or somesuch.
 </p>
 <br />
-<h2>Other notes</h2>
-<p>To get a custom ontology that is local and not on SF, you'll have to copy it into ".phenote/obo-files/".  Any reference to this ontology within your configuration file must match the filename.
-</p>
-
-<br />
-
 <h2>Other topics under construction:</h2>
 <h2>Location to put your personal obo files</h2>
+<p>To get a custom ontology that is local and not on SF, you'll have to copy it into ".phenote/obo-files/".  Any reference to this ontology within your configuration file must match the filename.
+</p>
 <h2>Anatomy of the config file</h2>
 <h2>Fields, types</h2>
 <h2>Making edits to a config file</h2>


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