[Obo-svn-commit] SF.net SVN: obo: [262] phenote/trunk/conf/flybase.cfg

[<mg...@us...>]

Revision: 262
          http://svn.sourceforge.net/obo/?rev=262&view=rev
Author:   mgibson
Date:     2006-12-20 09:29:53 -0800 (Wed, 20 Dec 2006)

Log Message:
-----------
put in pheno syntax config for fly

Modified Paths:
--------------
    phenote/trunk/conf/flybase.cfg

Modified: phenote/trunk/conf/flybase.cfg
===================================================================
--- phenote/trunk/conf/flybase.cfg	2006-12-20 00:31:10 UTC (rev 261)
+++ phenote/trunk/conf/flybase.cfg	2006-12-20 17:29:53 UTC (rev 262)
@@ -6,26 +6,24 @@
 
   <log config-file="conf/log4j-standalone.xml" />
 
-  <field name="Pub" />                      
+  <field name="Pub" syntax-abbrev="PUB"/>                      
 
-  <field name="Genotype" type="free_text"/>
+  <field name="Genotype" syntax-abbrev="GT" type="free_text"/>
 
-  <field name="Genetic Context" file="context.obo"/>
+  <field name="Genetic Context" file="context.obo" syntax-abbrev="GC"/>
 
-  <field name="Entity">
+  <field name="Entity" syntax-abbrev="E">
      <postcomp relationship-ontology="relationship.obo"/>
      <ontology name="Fly" file="fly_anatomy.obo" />
      <ontology name="GO" file="gene_ontology.obo"/>
      <ontology name="SP" file="spatial.obo"/>
   </field>
 
-  <field name="Quality" file="quality.obo"/>
+  <field name="Quality" file="quality.obo" syntax-abbrev="Q"/>
 
-  <field name="Absent" file="quality.obo" slim="absent_slim" />
-  <field name="Abnormal" file="quality.obo" slim="abnormal_slim" />
+  <field name="Absent" file="quality.obo" slim="absent_slim" syntax-abbrev="Tag"/>
+  <field name="Abnormal" file="quality.obo" slim="abnormal_slim" syntax-abbrev="Tag"/>
 
-  <field name="Evidence" file="evidence_code.obo"/>
+  <field name="Description" syntax-abbrev="Desc"/>
 
-  <field name="Description" />
-
 </phenote-configuration>


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