Re: [Obo-discuss] [obo-admin] Gerontology

[Helen P. <par...@eb...>]

Hi Daniel

we have some tools for producing application ontologies you might be 
interested in,

http://www.ebi.ac.uk/efo/

best wishes

Helen
On 30/09/2013 17:03, Chris Mungall wrote:
> Yes, I think your ontology should probably be a view over subsets of 
> other ontologies.
>
> Would you mind waiting for the namespace until the ontology 
> concretizes itself a little more?
>
>
> On Mon, Sep 30, 2013 at 3:31 AM, Daniel <D.A...@li... 
> <mailto:D.A...@li...>> wrote:
>
>     Dear Chris,
>     Yes, we have several existing ontologies that are highly relevant for
>     the gerontology.
>
>     We are thinking of how to effectively combine them.
>
>     One of the questions that arose was whether a single ontology would be
>     sufficient or whether it would be better to have a set of ontologies
>     that together conceptualize different aspects of gerontology but
>     separate concerns.
>
>     We want to share them either as a set or a single coherent ontology.
>
>     Best,
>     Daniel
>
>
>     On Fri, 2013-09-27 at 14:22 -0700, Chris Mungall wrote:
>     > Do you have an existing ontology you can share?
>     >
>     >
>     >
>     > On Fri, Sep 27, 2013 at 3:01 AM, Daniel
>     <D.A...@li... <mailto:D.A...@li...>>
>     > wrote:
>     >         Dear Melanie,
>     >         Thank you for your question. The reason for writing here is
>     >         that
>     >         I wanted to initialize the discussion about the Gerontology.
>     >
>     >         Yes, we would like to request the namespace for the
>     >         Gerontology
>     >         and therefore for aging research.
>     >
>     >         I will come back with more details soon.
>     >
>     >         Thanks,
>     >         Daniel
>     >
>     >
>     >         On Wed, 2013-09-25 at 14:12 -0700, Melanie Courtot wrote:
>     >         > Hi Daniel,
>     >         >
>     >         > It wasn't clear from your email whether you were
>     requesting
>     >         the GERO namespace or not.
>     >         > If yes, please consider instructions to do so listed at
>     >
>     http://code.google.com/p/obo-foundry-operations-committee/wiki/Policy_for_OBO_namespace_and_associated_PURL_requests
>     >         >
>     >         > Cheers,
>     >         > Melanie
>     >         >
>     >         >
>     >         > On 2013-09-25, at 2:42 AM, Daniel wrote:
>     >         >
>     >         > > Dear OBO Foundry,
>     >         > > I am scientist researching on the aging process and I
>     >         would be delighted
>     >         > > to be part of your effort towards formal knowledge
>     >         representations of
>     >         > > the biological/biomedical domain. In particular I
>     like to
>     >         establish an
>     >         > > open access ontology formalizing our
>     conceptualization of
>     >         the basic
>     >         > > aging process and therefore making aging
>     >         machine-understandable.
>     >         > >
>     >         > > The name of the ontology shall be Gerontology and the
>     >         namespace GERO.
>     >         > >
>     >         > > Best wishes,
>     >         > > Daniel
>     >         > >
>     >         > >
>     >         > >
>     >
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>     >         > ---
>     >         > Mélanie Courtot
>     >         > Ph.D. Candidate,
>     >         > BCCRC - Terry Fox Laboratory - 12th floor
>     >         > 675 West 10th Avenue
>     >         > Vancouver, BC
>     >         > V5Z 1L3, Canada
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-- 
Helen Parkinson, PhD
Team Leader
Samples Phenotypes and Ontologies Team
-------------------------------------------
European Bioinformatics Institute (EMBL-EBI)
European Molecular Biology Laboratory
Wellcome Trust Genome Campus
Hinxton
Cambridge CB10 1SD
United Kingdom

EBI 01223 494672
Skype: helen.parkinson.ebi
www.ebi.ac.uk/fgpt/