From: <cj...@yu...> - 2012-01-27 04:00:05
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Starting obodiff at /users/cjm/cvs/geneontology/oboedit/launch_scripts using 1024M of memory [INFO] Reading [obo-all/biological_process_prerelease/biological_process_prerelease.obo.CURRENT] (allowDangling = true) (followImports = true) [INFO] Reading [obo-all/biological_process_prerelease/biological_process_prerelease.obo] (allowDangling = true) (followImports = true) * Created object of type obo:TERM with id GO:0038066 * Created object of type obo:TERM with id GO:0061420 * Created object of type obo:TERM with id GO:0061421 * Created object of type obo:TERM with id GO:0097223 * Created object of type obo:TERM with id GO:0097224 * Created object of type obo:TERM with id GO:0097225 * Created object of type obo:TERM with id GO:0097226 * Created object of type obo:TERM with id GO:0097227 * Created object of type obo:TERM with id GO:0097228 * Created object of type obo:TERM with id GO:0097229 * Created object of type obo:TERM with id GO:0097230 * Created object of type obo:TERM with id GO:0097231 * Created object of type obo:TERM with id GO:1900058 * Created object of type obo:TERM with id GO:1900059 * Created object of type obo:TERM with id GO:1900060 * [Changed name of GO:0038066 from "null" to "p38MAPK cascade", Set definition of GO:0038066 to "An intracellular protein kinase cascade containing at least a p38 MAPK, a MAPKK and a MAP3K. The cascade can also contain two additional tiers: the upstream MAP4K and the downstream MAP Kinase-activated kinase (MAPKAPK). The kinases in each tier phosphorylate and activate the kinases in the downstream tier to transmit a signal within a cell.", Added definition dbxref GOC:signaling to GO:0038066, Added definition dbxref PMID:20811974 to GO:0038066, Added synonym "p38 cascade" to GO:0038066, Added general dbxref PMID:20811974 to synonym p38 cascade of GO:0038066, Changed synonym scope of GO:0038066 from "Related" to "Exact", Added synonym "p38 MAPK cascade" to GO:0038066, Added general dbxref GOC:bf to synonym p38 MAPK cascade of GO:0038066, Changed synonym scope of GO:0038066 from "Related" to "Exact", Created link GO:0038066 -OBO_REL:is_a-> GO:0051403, Assigned namespace "biologic al_process" to GO:0038066] * Changed name of GO:0038066 from "null" to "p38MAPK cascade" * Set definition of GO:0038066 to "An intracellular protein kinase cascade containing at least a p38 MAPK, a MAPKK and a MAP3K. The cascade can also contain two additional tiers: the upstream MAP4K and the downstream MAP Kinase-activated kinase (MAPKAPK). The kinases in each tier phosphorylate and activate the kinases in the downstream tier to transmit a signal within a cell." * Added definition dbxref GOC:signaling to GO:0038066 * Added definition dbxref PMID:20811974 to GO:0038066 * Added synonym "p38 cascade" to GO:0038066 * Added general dbxref PMID:20811974 to synonym p38 cascade of GO:0038066 * Changed synonym scope of GO:0038066 from "Related" to "Exact" * Added synonym "p38 MAPK cascade" to GO:0038066 * Added general dbxref GOC:bf to synonym p38 MAPK cascade of GO:0038066 * Changed synonym scope of GO:0038066 from "Related" to "Exact" * Created link GO:0038066 -OBO_REL:is_a-> GO:0051403 * Assigned namespace "biological_process" to GO:0038066 * [Changed name of GO:0061420 from "null" to "regulation of transcription from RNA polymerase II promoter in response to biotin starvation", Set definition of GO:0061420 to "Modulation of the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of deprivation of biotin.", Added definition dbxref GOC:dph to GO:0061420, Added definition dbxref PMID:16533810 to GO:0061420, Created link GO:0061420 -OBO_REL:is_a-> GO:0009267, Created link GO:0061420 -OBO_REL:is_a-> GO:0043618, Assigned namespace "biological_process" to GO:0061420] * Changed name of GO:0061420 from "null" to "regulation of transcription from RNA polymerase II promoter in response to biotin starvation" * Set definition of GO:0061420 to "Modulation of the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of deprivation of biotin." * Added definition dbxref GOC:dph to GO:0061420 * Added definition dbxref PMID:16533810 to GO:0061420 * Created link GO:0061420 -OBO_REL:is_a-> GO:0009267 * Created link GO:0061420 -OBO_REL:is_a-> GO:0043618 * Assigned namespace "biological_process" to GO:0061420 * [Changed name of GO:0061421 from "null" to "positive regulation of transcription by oleic acid", Set definition of GO:0061421 to "Any process involving oleic acid that activates or increases the rate of transcription.", Added definition dbxref GOC:dph to GO:0061421, Added definition dbxref PMID:20395639 to GO:0061421, Created link GO:0061421 -OBO_REL:is_a-> GO:0045991, Assigned namespace "biological_process" to GO:0061421] * Changed name of GO:0061421 from "null" to "positive regulation of transcription by oleic acid" * Set definition of GO:0061421 to "Any process involving oleic acid that activates or increases the rate of transcription." * Added definition dbxref GOC:dph to GO:0061421 * Added definition dbxref PMID:20395639 to GO:0061421 * Created link GO:0061421 -OBO_REL:is_a-> GO:0045991 * Assigned namespace "biological_process" to GO:0061421 * [Changed name of GO:0097223 from "null" to "sperm part", Set definition of GO:0097223 to "Any constituent part of a sperm, a mature male germ cell that develops from a spermatid.", Added definition dbxref GOC:cjm to GO:0097223, Created link GO:0097223 -OBO_REL:is_a-> GO:0044464, Assigned namespace "cellular_component" to GO:0097223] * Changed name of GO:0097223 from "null" to "sperm part" * Set definition of GO:0097223 to "Any constituent part of a sperm, a mature male germ cell that develops from a spermatid." * Added definition dbxref GOC:cjm to GO:0097223 * Created link GO:0097223 -OBO_REL:is_a-> GO:0044464 * Assigned namespace "cellular_component" to GO:0097223 * [Changed name of GO:0097224 from "null" to "sperm connecting piece", Set definition of GO:0097224 to "The segment of the sperm flagellum that attaches to the implantation fossa of the nucleus in the sperm head; from the remnant of the centriole at this point, the axoneme extends throughout the length of the flagellum.", Added definition dbxref GOC:cjm to GO:0097224, Added definition dbxref MP:0009830 to GO:0097224, Created link GO:0097224 -part_of-> GO:0009434, Created link GO:0097224 -OBO_REL:is_a-> GO:0097223, Assigned namespace "cellular_component" to GO:0097224] * Changed name of GO:0097224 from "null" to "sperm connecting piece" * Set definition of GO:0097224 to "The segment of the sperm flagellum that attaches to the implantation fossa of the nucleus in the sperm head; from the remnant of the centriole at this point, the axoneme extends throughout the length of the flagellum." * Added definition dbxref GOC:cjm to GO:0097224 * Added definition dbxref MP:0009830 to GO:0097224 * Created link GO:0097224 -part_of-> GO:0009434 * Created link GO:0097224 -OBO_REL:is_a-> GO:0097223 * Assigned namespace "cellular_component" to GO:0097224 * [Changed name of GO:0097225 from "null" to "sperm midpiece", Set definition of GO:0097225 to "The highly organized segment of the sperm flagellum which begins at the connecting piece and is characterized by the presence of 9 outer dense fibers (ODFs) that lie outside each of the 9 outer axonemal microtubule doublets and by a sheath of mitochondria that encloses the ODFs and the axoneme; the midpiece terminates about one-fourth of the way down the sperm flagellum at the annulus, which marks the beginning of the principal piece.", Added definition dbxref GOC:cjm to GO:0097225, Added definition dbxref MP:0009831 to GO:0097225, Created link GO:0097225 -OBO_REL:is_a-> GO:0097223, Created link GO:0097225 -part_of-> GO:0009434, Assigned namespace "cellular_component" to GO:0097225] * Changed name of GO:0097225 from "null" to "sperm midpiece" * Set definition of GO:0097225 to "The highly organized segment of the sperm flagellum which begins at the connecting piece and is characterized by the presence of 9 outer dense fibers (ODFs) that lie outside each of the 9 outer axonemal microtubule doublets and by a sheath of mitochondria that encloses the ODFs and the axoneme; the midpiece terminates about one-fourth of the way down the sperm flagellum at the annulus, which marks the beginning of the principal piece." * Added definition dbxref GOC:cjm to GO:0097225 * Added definition dbxref MP:0009831 to GO:0097225 * Created link GO:0097225 -OBO_REL:is_a-> GO:0097223 * Created link GO:0097225 -part_of-> GO:0009434 * Assigned namespace "cellular_component" to GO:0097225 * [Changed name of GO:0097226 from "null" to "sperm mitochondrial sheath", Set definition of GO:0097226 to "The tightly packed helical sheath of ATP-producing mitochondria restricted to the midpiece of the sperm flagellum.", Added definition dbxref GOC:cjm to GO:0097226, Added definition dbxref MP:0009832 to GO:0097226, Created link GO:0097226 -part_of-> GO:0009434, Created link GO:0097226 -OBO_REL:is_a-> GO:0097223, Assigned namespace "cellular_component" to GO:0097226] * Changed name of GO:0097226 from "null" to "sperm mitochondrial sheath" * Set definition of GO:0097226 to "The tightly packed helical sheath of ATP-producing mitochondria restricted to the midpiece of the sperm flagellum." * Added definition dbxref GOC:cjm to GO:0097226 * Added definition dbxref MP:0009832 to GO:0097226 * Created link GO:0097226 -part_of-> GO:0009434 * Created link GO:0097226 -OBO_REL:is_a-> GO:0097223 * Assigned namespace "cellular_component" to GO:0097226 * [Changed name of GO:0097227 from "null" to "sperm annulus", Set definition of GO:0097227 to "The ring-like, filamentous structure located at the distal end of the midpiece of the sperm flagellum; the annulus is thought to form a diffusion barrier between the midpiece and the principal piece and serve as a stabilizing structure for tail rigidity.", Added definition dbxref GOC:cjm to GO:0097227, Added definition dbxref MP:0009834 to GO:0097227, Created link GO:0097227 -OBO_REL:is_a-> GO:0097223, Created link GO:0097227 -part_of-> GO:0009434, Assigned namespace "cellular_component" to GO:0097227] * Changed name of GO:0097227 from "null" to "sperm annulus" * Set definition of GO:0097227 to "The ring-like, filamentous structure located at the distal end of the midpiece of the sperm flagellum; the annulus is thought to form a diffusion barrier between the midpiece and the principal piece and serve as a stabilizing structure for tail rigidity." * Added definition dbxref GOC:cjm to GO:0097227 * Added definition dbxref MP:0009834 to GO:0097227 * Created link GO:0097227 -OBO_REL:is_a-> GO:0097223 * Created link GO:0097227 -part_of-> GO:0009434 * Assigned namespace "cellular_component" to GO:0097227 * [Changed name of GO:0097228 from "null" to "sperm principal piece", Set definition of GO:0097228 to "The segment of the sperm flagellum where the mitochondrial sheath ends, and the outer dense fibers (ODFs) associated with outer axonemal doublets 3 and 8 are replaced by the 2 longitudinal columns of the fibrous sheath (FS) which run the length of the principal piece and are stabilized by circumferential ribs. The principal piece makes up ~2/3 of the length of the sperm flagellum and is defined by the presence of the FS and of only 7 (rather than 9) ODFs which taper and then terminate near the distal end of the principal piece.", Added definition dbxref GOC:cjm to GO:0097228, Added definition dbxref MP:0009836 to GO:0097228, Created link GO:0097228 -part_of-> GO:0009434, Created link GO:0097228 -OBO_REL:is_a-> GO:0097223, Assigned namespace "cellular_component" to GO:0097228] * Changed name of GO:0097228 from "null" to "sperm principal piece" * Set definition of GO:0097228 to "The segment of the sperm flagellum where the mitochondrial sheath ends, and the outer dense fibers (ODFs) associated with outer axonemal doublets 3 and 8 are replaced by the 2 longitudinal columns of the fibrous sheath (FS) which run the length of the principal piece and are stabilized by circumferential ribs. The principal piece makes up ~2/3 of the length of the sperm flagellum and is defined by the presence of the FS and of only 7 (rather than 9) ODFs which taper and then terminate near the distal end of the principal piece." * Added definition dbxref GOC:cjm to GO:0097228 * Added definition dbxref MP:0009836 to GO:0097228 * Created link GO:0097228 -part_of-> GO:0009434 * Created link GO:0097228 -OBO_REL:is_a-> GO:0097223 * Assigned namespace "cellular_component" to GO:0097228 * [Changed name of GO:0097229 from "null" to "sperm end piece", Set definition of GO:0097229 to "The short remaining region of the sperm flagellum, which contains only the axoneme surrounded by the plasma membrane.", Added definition dbxref GOC:cjm to GO:0097229, Added definition dbxref MP:0009837 to GO:0097229, Created link GO:0097229 -part_of-> GO:0009434, Created link GO:0097229 -OBO_REL:is_a-> GO:0097223, Assigned namespace "cellular_component" to GO:0097229] * Changed name of GO:0097229 from "null" to "sperm end piece" * Set definition of GO:0097229 to "The short remaining region of the sperm flagellum, which contains only the axoneme surrounded by the plasma membrane." * Added definition dbxref GOC:cjm to GO:0097229 * Added definition dbxref MP:0009837 to GO:0097229 * Created link GO:0097229 -part_of-> GO:0009434 * Created link GO:0097229 -OBO_REL:is_a-> GO:0097223 * Assigned namespace "cellular_component" to GO:0097229 * [Changed name of GO:0097230 from "null" to "cell motility in response to potassium ion", Set definition of GO:0097230 to "Any process involved in the controlled self-propelled movement of a cell that results in translocation of the cell from one place to another as a result of a potassium ion stimulus.", Added definition dbxref GOC:pf to GO:0097230, Added definition dbxref PMID:19363786 to GO:0097230, Added definition dbxref PMID:21239624 to GO:0097230, Added synonym "K+ facilitation of cell motility" to GO:0097230, Changed synonym scope of GO:0097230 from "Related" to "Exact", Added synonym "potassium ion facilitation of cell motility" to GO:0097230, Changed synonym scope of GO:0097230 from "Related" to "Exact", Created link GO:0097230 -OBO_REL:is_a-> GO:0035865, Created link GO:0097230 -OBO_REL:is_a-> GO:0048870, Assigned namespace "biological_process" to GO:0097230] * Changed name of GO:0097230 from "null" to "cell motility in response to potassium ion" * Set definition of GO:0097230 to "Any process involved in the controlled self-propelled movement of a cell that results in translocation of the cell from one place to another as a result of a potassium ion stimulus." * Added definition dbxref GOC:pf to GO:0097230 * Added definition dbxref PMID:19363786 to GO:0097230 * Added definition dbxref PMID:21239624 to GO:0097230 * Added synonym "K+ facilitation of cell motility" to GO:0097230 * Changed synonym scope of GO:0097230 from "Related" to "Exact" * Added synonym "potassium ion facilitation of cell motility" to GO:0097230 * Changed synonym scope of GO:0097230 from "Related" to "Exact" * Created link GO:0097230 -OBO_REL:is_a-> GO:0035865 * Created link GO:0097230 -OBO_REL:is_a-> GO:0048870 * Assigned namespace "biological_process" to GO:0097230 * [Changed name of GO:0097231 from "null" to "cell motility in response to calcium ion", Set definition of GO:0097231 to "Any process involved in the controlled self-propelled movement of a cell that results in translocation of the cell from one place to another as a result of a calcium ion stimulus.", Added definition dbxref GOC:pf to GO:0097231, Added definition dbxref PMID:19363786 to GO:0097231, Added definition dbxref PMID:21239624 to GO:0097231, Added definition dbxref PMID:8937985 to GO:0097231, Added synonym "Ca2+ facilitation of cell motility" to GO:0097231, Changed synonym scope of GO:0097231 from "Related" to "Exact", Added synonym "calcium ion facilitation of cell motility" to GO:0097231, Changed synonym scope of GO:0097231 from "Related" to "Exact", Created link GO:0097231 -OBO_REL:is_a-> GO:0048870, Created link GO:0097231 -OBO_REL:is_a-> GO:0071277, Assigned namespace "biological_process" to GO:0097231] * Changed name of GO:0097231 from "null" to "cell motility in response to calcium ion" * Set definition of GO:0097231 to "Any process involved in the controlled self-propelled movement of a cell that results in translocation of the cell from one place to another as a result of a calcium ion stimulus." * Added definition dbxref GOC:pf to GO:0097231 * Added definition dbxref PMID:19363786 to GO:0097231 * Added definition dbxref PMID:21239624 to GO:0097231 * Added definition dbxref PMID:8937985 to GO:0097231 * Added synonym "Ca2+ facilitation of cell motility" to GO:0097231 * Changed synonym scope of GO:0097231 from "Related" to "Exact" * Added synonym "calcium ion facilitation of cell motility" to GO:0097231 * Changed synonym scope of GO:0097231 from "Related" to "Exact" * Created link GO:0097231 -OBO_REL:is_a-> GO:0048870 * Created link GO:0097231 -OBO_REL:is_a-> GO:0071277 * Assigned namespace "biological_process" to GO:0097231 * [Changed name of GO:1900058 from "null" to "regulation of sulfate assimilation", Set definition of GO:1900058 to "Any process that modulates the frequency, rate or extent of sulfate assimilation.", Added definition dbxref GOC:TermGenie to GO:1900058, Added definition dbxref PMID:7601277 to GO:1900058, Added definition dbxref PMID:7891681 to GO:1900058, Added synonym "regulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor" to GO:1900058, Added general dbxref GOC:TermGenie to synonym regulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor of GO:1900058, Changed synonym scope of GO:1900058 from "Related" to "Narrow", Added synonym "regulation of sulphate assimilation" to GO:1900058, Added general dbxref GOC:TermGenie to synonym regulation of sulphate assimilation of GO:1900058, Changed synon ym scope of GO:1900058 from "Related" to "Exact", Added synonym "regulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor" to GO:1900058, Added general dbxref GOC:TermGenie to synonym regulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor of GO:1900058, Changed synonym scope of GO:1900058 from "Related" to "Narrow", Created link GO:1900058 -OBO_REL:is_a-> GO:0042762, Created link GO:1900058 -regulates-> GO:0000103, Assigned namespace "biological_process" to GO:1900058] * Changed name of GO:1900058 from "null" to "regulation of sulfate assimilation" * Set definition of GO:1900058 to "Any process that modulates the frequency, rate or extent of sulfate assimilation." * Added definition dbxref GOC:TermGenie to GO:1900058 * Added definition dbxref PMID:7601277 to GO:1900058 * Added definition dbxref PMID:7891681 to GO:1900058 * Added synonym "regulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor" to GO:1900058 * Added general dbxref GOC:TermGenie to synonym regulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor of GO:1900058 * Changed synonym scope of GO:1900058 from "Related" to "Narrow" * Added synonym "regulation of sulphate assimilation" to GO:1900058 * Added general dbxref GOC:TermGenie to synonym regulation of sulphate assimilation of GO:1900058 * Changed synonym scope of GO:1900058 from "Related" to "Exact" * Added synonym "regulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor" to GO:1900058 * Added general dbxref GOC:TermGenie to synonym regulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor of GO:1900058 * Changed synonym scope of GO:1900058 from "Related" to "Narrow" * Created link GO:1900058 -OBO_REL:is_a-> GO:0042762 * Created link GO:1900058 -regulates-> GO:0000103 * Assigned namespace "biological_process" to GO:1900058 * [Changed name of GO:1900059 from "null" to "positive regulation of sulfate assimilation", Set definition of GO:1900059 to "Any process that activates or increases the frequency, rate or extent of sulfate assimilation.", Added definition dbxref GOC:TermGenie to GO:1900059, Added definition dbxref PMID:7601277 to GO:1900059, Added definition dbxref PMID:7891681 to GO:1900059, Added synonym "activation of sulfate assimilation" to GO:1900059, Added general dbxref GOC:TermGenie to synonym activation of sulfate assimilation of GO:1900059, Added synonym "activation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor" to GO:1900059, Added general dbxref GOC:TermGenie to synonym activation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor of GO:1900059, Changed synonym scope of GO:1900059 from "Related" to "Na rrow", Added synonym "activation of sulphate assimilation" to GO:1900059, Added general dbxref GOC:TermGenie to synonym activation of sulphate assimilation of GO:1900059, Changed synonym scope of GO:1900059 from "Related" to "Exact", Added synonym "activation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor" to GO:1900059, Added general dbxref GOC:TermGenie to synonym activation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor of GO:1900059, Changed synonym scope of GO:1900059 from "Related" to "Narrow", Added synonym "positive regulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor" to GO:1900059, Added general dbxref GOC:TermGenie to synonym positive regulation of sulfate assimilation, phosphoadeny lyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor of GO:1900059, Changed synonym scope of GO:1900059 from "Related" to "Narrow", Added synonym "positive regulation of sulphate assimilation" to GO:1900059, Added general dbxref GOC:TermGenie to synonym positive regulation of sulphate assimilation of GO:1900059, Changed synonym scope of GO:1900059 from "Related" to "Exact", Added synonym "positive regulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor" to GO:1900059, Added general dbxref GOC:TermGenie to synonym positive regulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor of GO:1900059, Changed synonym scope of GO:1900059 from "Related" to "Narrow", Added synonym "up regulation of sulfate assimilation" to GO:1900059, Added general dbxref GOC:TermGenie to synonym up regulation of sulfate assimilation of GO:1900059, Added synonym "up regulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor" to GO:1900059, Added general dbxref GOC:TermGenie to synonym up regulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor of GO:1900059, Changed synonym scope of GO:1900059 from "Related" to "Narrow", Added synonym "up regulation of sulphate assimilation" to GO:1900059, Added general dbxref GOC:TermGenie to synonym up regulation of sulphate assimilation of GO:1900059, Changed synonym scope of GO:1900059 from "Related" to "Exact", Added synonym "up regulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor" to GO:1900059, Added general dbxref G OC:TermGenie to synonym up regulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor of GO:1900059, Changed synonym scope of GO:1900059 from "Related" to "Narrow", Added synonym "up-regulation of sulfate assimilation" to GO:1900059, Added general dbxref GOC:TermGenie to synonym up-regulation of sulfate assimilation of GO:1900059, Added synonym "up-regulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor" to GO:1900059, Added general dbxref GOC:TermGenie to synonym up-regulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor of GO:1900059, Changed synonym scope of GO:1900059 from "Related" to "Narrow", Added synonym "up-regulation of sulphate assimilation" to GO:1900059, Added general dbxref GOC:TermG enie to synonym up-regulation of sulphate assimilation of GO:1900059, Changed synonym scope of GO:1900059 from "Related" to "Exact", Added synonym "up-regulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor" to GO:1900059, Added general dbxref GOC:TermGenie to synonym up-regulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor of GO:1900059, Changed synonym scope of GO:1900059 from "Related" to "Narrow", Added synonym "upregulation of sulfate assimilation" to GO:1900059, Added general dbxref GOC:TermGenie to synonym upregulation of sulfate assimilation of GO:1900059, Added synonym "upregulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor" to GO:1900059, Added general dbxref GOC:TermGenie to s ynonym upregulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor of GO:1900059, Changed synonym scope of GO:1900059 from "Related" to "Narrow", Added synonym "upregulation of sulphate assimilation" to GO:1900059, Added general dbxref GOC:TermGenie to synonym upregulation of sulphate assimilation of GO:1900059, Changed synonym scope of GO:1900059 from "Related" to "Exact", Added synonym "upregulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor" to GO:1900059, Added general dbxref GOC:TermGenie to synonym upregulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor of GO:1900059, Changed synonym scope of GO:1900059 from "Related" to "Narrow", Created link GO:1900059 -positively_regulates-> GO:000 0103, Created link GO:1900059 -OBO_REL:is_a-> GO:0051176, Created link GO:1900059 -OBO_REL:is_a-> GO:1900058, Assigned namespace "biological_process" to GO:1900059] * Changed name of GO:1900059 from "null" to "positive regulation of sulfate assimilation" * Set definition of GO:1900059 to "Any process that activates or increases the frequency, rate or extent of sulfate assimilation." * Added definition dbxref GOC:TermGenie to GO:1900059 * Added definition dbxref PMID:7601277 to GO:1900059 * Added definition dbxref PMID:7891681 to GO:1900059 * Added synonym "activation of sulfate assimilation" to GO:1900059 * Added general dbxref GOC:TermGenie to synonym activation of sulfate assimilation of GO:1900059 * Added synonym "activation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor" to GO:1900059 * Added general dbxref GOC:TermGenie to synonym activation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor of GO:1900059 * Changed synonym scope of GO:1900059 from "Related" to "Narrow" * Added synonym "activation of sulphate assimilation" to GO:1900059 * Added general dbxref GOC:TermGenie to synonym activation of sulphate assimilation of GO:1900059 * Changed synonym scope of GO:1900059 from "Related" to "Exact" * Added synonym "activation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor" to GO:1900059 * Added general dbxref GOC:TermGenie to synonym activation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor of GO:1900059 * Changed synonym scope of GO:1900059 from "Related" to "Narrow" * Added synonym "positive regulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor" to GO:1900059 * Added general dbxref GOC:TermGenie to synonym positive regulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor of GO:1900059 * Changed synonym scope of GO:1900059 from "Related" to "Narrow" * Added synonym "positive regulation of sulphate assimilation" to GO:1900059 * Added general dbxref GOC:TermGenie to synonym positive regulation of sulphate assimilation of GO:1900059 * Changed synonym scope of GO:1900059 from "Related" to "Exact" * Added synonym "positive regulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor" to GO:1900059 * Added general dbxref GOC:TermGenie to synonym positive regulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor of GO:1900059 * Changed synonym scope of GO:1900059 from "Related" to "Narrow" * Added synonym "up regulation of sulfate assimilation" to GO:1900059 * Added general dbxref GOC:TermGenie to synonym up regulation of sulfate assimilation of GO:1900059 * Added synonym "up regulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor" to GO:1900059 * Added general dbxref GOC:TermGenie to synonym up regulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor of GO:1900059 * Changed synonym scope of GO:1900059 from "Related" to "Narrow" * Added synonym "up regulation of sulphate assimilation" to GO:1900059 * Added general dbxref GOC:TermGenie to synonym up regulation of sulphate assimilation of GO:1900059 * Changed synonym scope of GO:1900059 from "Related" to "Exact" * Added synonym "up regulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor" to GO:1900059 * Added general dbxref GOC:TermGenie to synonym up regulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor of GO:1900059 * Changed synonym scope of GO:1900059 from "Related" to "Narrow" * Added synonym "up-regulation of sulfate assimilation" to GO:1900059 * Added general dbxref GOC:TermGenie to synonym up-regulation of sulfate assimilation of GO:1900059 * Added synonym "up-regulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor" to GO:1900059 * Added general dbxref GOC:TermGenie to synonym up-regulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor of GO:1900059 * Changed synonym scope of GO:1900059 from "Related" to "Narrow" * Added synonym "up-regulation of sulphate assimilation" to GO:1900059 * Added general dbxref GOC:TermGenie to synonym up-regulation of sulphate assimilation of GO:1900059 * Changed synonym scope of GO:1900059 from "Related" to "Exact" * Added synonym "up-regulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor" to GO:1900059 * Added general dbxref GOC:TermGenie to synonym up-regulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor of GO:1900059 * Changed synonym scope of GO:1900059 from "Related" to "Narrow" * Added synonym "upregulation of sulfate assimilation" to GO:1900059 * Added general dbxref GOC:TermGenie to synonym upregulation of sulfate assimilation of GO:1900059 * Added synonym "upregulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor" to GO:1900059 * Added general dbxref GOC:TermGenie to synonym upregulation of sulfate assimilation, phosphoadenylyl sulfate reduction by an oxidoreductase, acting on sulfur group of donors, NAD or NADP as acceptor of GO:1900059 * Changed synonym scope of GO:1900059 from "Related" to "Narrow" * Added synonym "upregulation of sulphate assimilation" to GO:1900059 * Added general dbxref GOC:TermGenie to synonym upregulation of sulphate assimilation of GO:1900059 * Changed synonym scope of GO:1900059 from "Related" to "Exact" * Added synonym "upregulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor" to GO:1900059 * Added general dbxref GOC:TermGenie to synonym upregulation of sulphate assimilation, phosphoadenylyl sulphate reduction by an oxidoreductase, acting on sulphur group of donors, NAD or NADP as acceptor of GO:1900059 * Changed synonym scope of GO:1900059 from "Related" to "Narrow" * Created link GO:1900059 -positively_regulates-> GO:0000103 * Created link GO:1900059 -OBO_REL:is_a-> GO:0051176 * Created link GO:1900059 -OBO_REL:is_a-> GO:1900058 * Assigned namespace "biological_process" to GO:1900059 * [Changed name of GO:1900060 from "null" to "negative regulation of ceramide biosynthetic process", Set definition of GO:1900060 to "Any process that stops, prevents or reduces the frequency, rate or extent of ceramide biosynthetic process.", Added definition dbxref GOC:TermGenie to GO:1900060, Added definition dbxref PMID:15302821 to GO:1900060, Added synonym "down regulation of ceramide anabolism" to GO:1900060, Added general dbxref GOC:TermGenie to synonym down regulation of ceramide anabolism of GO:1900060, Changed synonym scope of GO:1900060 from "Related" to "Exact", Added synonym "down regulation of ceramide biosynthesis" to GO:1900060, Added general dbxref GOC:TermGenie to synonym down regulation of ceramide biosynthesis of GO:1900060, Changed synonym scope of GO:1900060 from "Related" to "Exact", Added synonym "down regulation of ceramide biosynthetic process" to GO:1900060, Added general dbxref GOC:TermGenie to synonym down regulation of ceramide biosynthetic proce ss of GO:1900060, Added synonym "down regulation of ceramide formation" to GO:1900060, Added general dbxref GOC:TermGenie to synonym down regulation of ceramide formation of GO:1900060, Changed synonym scope of GO:1900060 from "Related" to "Exact", Added synonym "down regulation of ceramide synthesis" to GO:1900060, Added general dbxref GOC:TermGenie to synonym down regulation of ceramide synthesis of GO:1900060, Changed synonym scope of GO:1900060 from "Related" to "Exact", Added synonym "down-regulation of ceramide anabolism" to GO:1900060, Added general dbxref GOC:TermGenie to synonym down-regulation of ceramide anabolism of GO:1900060, Changed synonym scope of GO:1900060 from "Related" to "Exact", Added synonym "down-regulation of ceramide biosynthesis" to GO:1900060, Added general dbxref GOC:TermGenie to synonym down-regulation of ceramide biosynthesis of GO:1900060, Changed synonym scope of GO:1900060 from "Related" to "Exact", Added synonym "down-regulation of ceramid e biosynthetic process" to GO:1900060, Added general dbxref GOC:TermGenie to synonym down-regulation of ceramide biosynthetic process of GO:1900060, Added synonym "down-regulation of ceramide formation" to GO:1900060, Added general dbxref GOC:TermGenie to synonym down-regulation of ceramide formation of GO:1900060, Changed synonym scope of GO:1900060 from "Related" to "Exact", Added synonym "down-regulation of ceramide synthesis" to GO:1900060, Added general dbxref GOC:TermGenie to synonym down-regulation of ceramide synthesis of GO:1900060, Changed synonym scope of GO:1900060 from "Related" to "Exact", Added synonym "downregulation of ceramide anabolism" to GO:1900060, Added general dbxref GOC:TermGenie to synonym downregulation of ceramide anabolism of GO:1900060, Changed synonym scope of GO:1900060 from "Related" to "Exact", Added synonym "downregulation of ceramide biosynthesis" to GO:1900060, Added general dbxref GOC:TermGenie to synonym downregulation of ceramide biosy nthesis of GO:1900060, Changed synonym scope of GO:1900060 from "Related" to "Exact", Added synonym "downregulation of ceramide biosynthetic process" to GO:1900060, Added general dbxref GOC:TermGenie to synonym downregulation of ceramide biosynthetic process of GO:1900060, Added synonym "downregulation of ceramide formation" to GO:1900060, Added general dbxref GOC:TermGenie to synonym downregulation of ceramide formation of GO:1900060, Changed synonym scope of GO:1900060 from "Related" to "Exact", Added synonym "downregulation of ceramide synthesis" to GO:1900060, Added general dbxref GOC:TermGenie to synonym downregulation of ceramide synthesis of GO:1900060, Changed synonym scope of GO:1900060 from "Related" to "Exact", Added synonym "inhibition of ceramide anabolism" to GO:1900060, Added general dbxref GOC:TermGenie to synonym inhibition of ceramide anabolism of GO:1900060, Changed synonym scope of GO:1900060 from "Related" to "Exact", Added synonym "inhibition of ceramid e biosynthesis" to GO:1900060, Added general dbxref GOC:TermGenie to synonym inhibition of ceramide biosynthesis of GO:1900060, Changed synonym scope of GO:1900060 from "Related" to "Exact", Added synonym "inhibition of ceramide biosynthetic process" to GO:1900060, Added general dbxref GOC:TermGenie to synonym inhibition of ceramide biosynthetic process of GO:1900060, Added synonym "inhibition of ceramide formation" to GO:1900060, Added general dbxref GOC:TermGenie to synonym inhibition of ceramide formation of GO:1900060, Changed synonym scope of GO:1900060 from "Related" to "Exact", Added synonym "inhibition of ceramide synthesis" to GO:1900060, Added general dbxref GOC:TermGenie to synonym inhibition of ceramide synthesis of GO:1900060, Changed synonym scope of GO:1900060 from "Related" to "Exact", Added synonym "negative regulation of ceramide anabolism" to GO:1900060, Added general dbxref GOC:TermGenie to synonym negative regulation of ceramide anabolism of GO:1900060, Changed synonym scope of GO:1900060 from "Related" to "Exact", Added synonym "negative regulation of ceramide biosynthesis" to GO:1900060, Added general dbxref GOC:TermGenie to synonym negative regulation of ceramide biosynthesis of GO:1900060, Changed synonym scope of GO:1900060 from "Related" to "Exact", Added synonym "negative regulation of ceramide formation" to GO:1900060, Added general dbxref GOC:TermGenie to synonym negative regulation of ceramide formation of GO:1900060, Changed synonym scope of GO:1900060 from "Related" to "Exact", Added synonym "negative regulation of ceramide synthesis" to GO:1900060, Added general dbxref GOC:TermGenie to synonym negative regulation of ceramide synthesis of GO:1900060, Changed synonym scope of GO:1900060 from "Related" to "Exact", Created link GO:1900060 -OBO_REL:is_a-> GO:2000303, Created link GO:1900060 -negatively_regulates-> GO:0046513, Created link GO:1900060 -OBO_REL:is_a-> GO:0090155, Assigned namespace "biological_process" to GO:1900060] * Changed name of GO:1900060 from "null" to "negative regulation of ceramide biosynthetic process" * Set definition of GO:1900060 to "Any process that stops, prevents or reduces the frequency, rate or extent of ceramide biosynthetic process." * Added definition dbxref GOC:TermGenie to GO:1900060 * Added definition dbxref PMID:15302821 to GO:1900060 * Added synonym "down regulation of ceramide anabolism" to GO:1900060 * Added general dbxref GOC:TermGenie to synonym down regulation of ceramide anabolism of GO:1900060 * Changed synonym scope of GO:1900060 from "Related" to "Exact" * Added synonym "down regulation of ceramide biosynthesis" to GO:1900060 * Added general dbxref GOC:TermGenie to synonym down regulation of ceramide biosynthesis of GO:1900060 * Changed synonym scope of GO:1900060 from "Related" to "Exact" * Added synonym "down regulation of ceramide biosynthetic process" to GO:1900060 * Added general dbxref GOC:TermGenie to synonym down regulation of ceramide biosynthetic process of GO:1900060 * Added synonym "down regulation of ceramide formation" to GO:1900060 * Added general dbxref GOC:TermGenie to synonym down regulation of ceramide formation of GO:1900060 * Changed synonym scope of GO:1900060 from "Related" to "Exact" * Added synonym "down regulation of ceramide synthesis" to GO:1900060 * Added general dbxref GOC:TermGenie to synonym down regulation of ceramide synthesis of GO:1900060 * Changed synonym scope of GO:1900060 from "Related" to "Exact" * Added synonym "down-regulation of ceramide anabolism" to GO:1900060 * Added general dbxref GOC:TermGenie to synonym down-regulation of ceramide anabolism of GO:1900060 * Changed synonym scope of GO:1900060 from "Related" to "Exact" * Added synonym "down-regulation of ceramide biosynthesis" to GO:1900060 * Added general dbxref GOC:TermGenie to synonym down-regulation of ceramide biosynthesis of GO:1900060 * Changed synonym scope of GO:1900060 from "Related" to "Exact" * Added synonym "down-regulation of ceramide biosynthetic process" to GO:1900060 * Added general dbxref GOC:TermGenie to synonym down-regulation of ceramide biosynthetic process of GO:1900060 * Added synonym "down-regulation of ceramide formation" to GO:1900060 * Added general dbxref GOC:TermGenie to synonym down-regulation of ceramide formation of GO:1900060 * Changed synonym scope of GO:1900060 from "Related" to "Exact" * Added synonym "down-regulation of ceramide synthesis" to GO:1900060 * Added general dbxref GOC:TermGenie to synonym down-regulation of ceramide synthesis of GO:1900060 * Changed synonym scope of GO:1900060 from "Related" to "Exact" * Added synonym "downregulation of ceramide anabolism" to GO:1900060 * Added general dbxref GOC:TermGenie to synonym downregulation of ceramide anabolism of GO:1900060 * Changed synonym scope of GO:1900060 from "Related" to "Exact" * Added synonym "downregulation of ceramide biosynthesis" to GO:1900060 * Added general dbxref GOC:TermGenie to synonym downregulation of ceramide biosynthesis of GO:1900060 * Changed synonym scope of GO:1900060 from "Related" to "Exact" * Added synonym "downregulation of ceramide biosynthetic process" to GO:1900060 * Added general dbxref GOC:TermGenie to synonym downregulation of ceramide biosynthetic process of GO:1900060 * Added synonym "downregulation of ceramide formation" to GO:1900060 * Added general dbxref GOC:TermGenie to synonym downregulation of ceramide formation of GO:1900060 * Changed synonym scope of GO:1900060 from "Related" to "Exact" * Added synonym "downregulation of ceramide synthesis" to GO:1900060 * Added general dbxref GOC:TermGenie to synonym downregulation of ceramide synthesis of GO:1900060 * Changed synonym scope of GO:1900060 from "Related" to "Exact" * Added synonym "inhibition of ceramide anabolism" to GO:1900060 * Added general dbxref GOC:TermGenie to synonym inhibition of ceramide anabolism of GO:1900060 * Changed synonym scope of GO:1900060 from "Related" to "Exact" * Added synonym "inhibition of ceramide biosynthesis" to GO:1900060 * Added general dbxref GOC:TermGenie to synonym inhibition of ceramide biosynthesis of GO:1900060 * Changed synonym scope of GO:1900060 from "Related" to "Exact" * Added synonym "inhibition of ceramide biosynthetic process" to GO:1900060 * Added general dbxref GOC:TermGenie to synonym inhibition of ceramide biosynthetic process of GO:1900060 * Added synonym "inhibition of ceramide formation" to GO:1900060 * Added general dbxref GOC:TermGenie to synonym inhibition of ceramide formation of GO:1900060 * Changed synonym scope of GO:1900060 from "Related" to "Exact" * Added synonym "inhibition of ceramide synthesis" to GO:1900060 * Added general dbxref GOC:TermGenie to synonym inhibition of ceramide synthesis of GO:1900060 * Changed synonym scope of GO:1900060 from "Related" to "Exact" * Added synonym "negative regulation of ceramide anabolism" to GO:1900060 * Added general dbxref GOC:TermGenie to synonym negative regulation of ceramide anabolism of GO:1900060 * Changed synonym scope of GO:1900060 from "Related" to "Exact" * Added synonym "negative regulation of ceramide biosynthesis" to GO:1900060 * Added general dbxref GOC:TermGenie to synonym negative regulation of ceramide biosynthesis of GO:1900060 * Changed synonym scope of GO:1900060 from "Related" to "Exact" * Added synonym "negative regulation of ceramide formation" to GO:1900060 * Added general dbxref GOC:TermGenie to synonym negative regulation of ceramide formation of GO:1900060 * Changed synonym scope of GO:1900060 from "Related" to "Exact" * Added synonym "negative regulation of ceramide synthesis" to GO:1900060 * Added general dbxref GOC:TermGenie to synonym negative regulation of ceramide synthesis of GO:1900060 * Changed synonym scope of GO:1900060 from "Related" to "Exact" * Created link GO:1900060 -OBO_REL:is_a-> GO:2000303 * Created link GO:1900060 -negatively_regulates-> GO:0046513 * Created link GO:1900060 -OBO_REL:is_a-> GO:0090155 * Assigned namespace "biological_process" to GO:1900060 * Changed name of GO:0000161 from "MAPKKK cascade involved in osmosensory signaling pathway" to "MAPK cascade involved in osmosensory signaling pathway" * Changed definition of GO:0000161 from "MAPKKK cascade involved in signal transduction in response to change in osmotic conditions." to "A MAPK cascade involved in signal transduction in response to change in osmotic conditions." * Added synonym "MAPKKK cascade involved in osmosensory signaling pathway" to GO:0000161 * Added general dbxref GOC:signaling to synonym MAPKKK cascade involved in osmosensory signaling pathway of GO:0000161 * Changed synonym scope of GO:0000161 from "Related" to "Exact" * Changed name of GO:0000165 from "MAPKKK cascade" to "MAPK cascade" * Added comment "MAPK cascades lie downstream of many cell surface receptors and cooperate in transmitting various extracellular signals to the nucleus. One way by which the specificity of each cascade is regulated is through the existence of several distinct components in each tier of the different cascades. The cascades are typically named according to the component in the MAPK tier." * Changed definition of GO:0000165 from "A series of protein phosphorylation events catalyzed by MAP kinases, by which a signal is passed on to downstream components within a cell. The MAPKKK cascade begins with phosphorylation of a MAPKK by a MAPKKK, and ends with phosphorylation of a downstream target by MAPK." to "An intracellular protein kinase cascade containing at least a MAPK, a MAPKK and a MAP3K. The cascade can also contain two additional tiers: the upstream MAP4K and the downstream MAP Kinase-activated kinase (MAPKAPK). The kinases in each tier phosphorylate and activate the kinases in the downstream tier to transmit a signal within a cell." * Added definition dbxref PMID:20811974 to GO:0000165 * Changed synonym scope of GO:0000165 from "Exact" to "Narrow" * Deleted synonym "MAPK cascade" from GO:0000165 * Added synonym "MAPKKK cascade" to GO:0000165 * Added general dbxref GOC:curators to synonym MAPKKK cascade of GO:0000165 * Changed synonym scope of GO:0000165 from "Related" to "Exact" * Changed name of GO:0000196 from "MAPKKK cascade involved in cell wall biogenesis" to "MAPK cascade involved in cell wall biogenesis" * Changed definition of GO:0000196 from "A MAPKKK cascade culminating in the phosphorylation and activation of a MAP kinase that occurs in the context of cell wall biogenesis, the assembly and arrangement of the cell wall, the rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal and most prokaryotic cells." to "A MAPK cascade that contributes to of cell wall biogenesis, the assembly and arrangement of the cell wall, the rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal and most prokaryotic cells." * Added synonym "MAPKKK cascade involved in cell wall biogenesis" to GO:0000196 * Added general dbxref GOC:signaling to synonym MAPKKK cascade involved in cell wall biogenesis of GO:0000196 * Changed synonym scope of GO:0000196 from "Related" to "Exact" * Changed definition of GO:0007243 from "A series of reactions that occur within the cell, mediated by protein kinases, which occurs as a result of a single trigger reaction or compound." to "A series of reactions in which a signal is passed on to downstream proteins within the cell by sequential protein phosphorylation and activation of the cascade components." * Added definition dbxref GOC:signaling to GO:0007243 * Changed definition of GO:0007254 from "A cascade of protein kinase activities, culminating in the phosphorylation and activation of a member of the JUN kinase subfamily of stress-activated protein kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases that is activated primarily by cytokines and exposure to environmental stress." to "An intracellular protein kinase cascade containing at least a JNK (a MAPK), a JNKK (a MAPKK) and a JUN3K (a MAP3K). The cascade can also contain two additional tiers: the upstream MAP4K and the downstream MAP Kinase-activated kinase (MAPKAPK). The kinases in each tier phosphorylate and activate the kinases in the downstream tier to transmit a signal within a cell." * Added definition dbxref GOC:signaling to GO:0007254 * Added definition dbxref PMID:20811974 to GO:0007254 * Added synonym "c-Jun N-terminal kinase cascade" to GO:0007254 * Added general dbxref PMID:20811974 to synonym c-Jun N-terminal kinase cascade of GO:0007254 * Changed synonym scope of GO:0007254 from "Related" to "Exact" * Added general dbxref GOC:mah to synonym forebrain dorsal-ventral pattern formation of GO:0021798 * Changed name of GO:0035420 from "MAPKKK cascade involved in innate immune response" to "MAPK cascade involved in innate immune response" * Changed definition of GO:0035420 from "A MAPKKK cascade culminating in the phosphorylation and activation of a MAP kinase that occurs in the context of an innate immune response, a defense response mediated by germline encoded components that directly recognize components of potential pathogens." to "A MAPK cascade that contributes to an innate immune response, a defense response mediated by germline encoded components that directly recognize components of potential pathogens." * Added synonym "MAPKKK cascade involved in innate immune response" to GO:0035420 * Added general dbxref GOC:signaling to synonym MAPKKK cascade involved in innate immune response of GO:0035420 * Changed synonym scope of GO:0035420 from "Related" to "Exact" * Changed name of GO:0038029 from "epidermal growth factor receptor signaling pathway via MAPKKK cascade" to "epidermal growth factor receptor signaling pathway via MAPK cascade" * Added synonym "epidermal growth factor receptor signaling pathway via MAPKKK cascade" to GO:0038029 * Added general dbxref GOC:signaling to synonym epidermal growth factor receptor signaling pathway via MAPKKK cascade of GO:0038029 * Changed synonym scope of GO:0038029 from "Related" to "Exact" * Changed name of GO:0038030 from "non-canonical Wnt receptor signaling pathway via MAPKKK cascade" to "non-canonical Wnt receptor signaling pathway via MAPK cascade" * Added synonym "non-canonical Wnt receptor signaling pathway via MAPKKK cascade" to GO:0038030 * Added general dbxref GOC:signaling to synonym non-canonical Wnt receptor signaling pathway via MAPKKK cascade of GO:0038030 * Changed synonym scope of GO:0038030 from "Related" to "Exact" * Changed name of GO:0043408 from "regulation of MAPKKK cascade" to "regulation of MAPK cascade" * Changed definition of GO:0043408 from "Any process that modulates the frequency, rate or extent of signal transduction mediated by the MAPKKK cascade." to "Any process that modulates the frequency, rate or extent of signal transduction mediated by the MAP kinase (MAPK) cascade." * Added synonym "regulation of MAP kinase cascade" to GO:0043408 * Added general dbxref GOC:signaling to synonym regulation of MAP kinase cascade of GO:0043408 * Changed synonym scope of GO:0043408 from "Related" to "Exact" * Added synonym "regulation of MAPKKK cascade" to GO:0043408 * Added general dbxref GOC:signaling to synonym regulation of MAPKKK cascade of GO:0043408 * Changed synonym scope of GO:0043408 from "Related" to "Exact" * Added synonym "regulation of mitogen activated protein kinase cascade" to GO:0043408 * Added general dbxref GOC:signaling to synonym regulation of mitogen activated protein kinase cascade of GO:0043408 * Changed synonym scope of GO:0043408 from "Related" to "Exact" * Added synonym "regulation of mitogen-activated protein kinase cascade" to GO:0043408 * Added general dbxref GOC:signaling to synonym regulation of mitogen-activated protein kinase cascade of GO:0043408 * Changed synonym scope of GO:0043408 from "Related" to "Exact" * Changed name of GO:0043409 from "negative regulation of MAPKKK cascade" to "negative regulation of MAPK cascade" * Added synonym "down regulation of MAPK cascade" to GO:0043409 * Added general dbxref GOC:signaling to synonym down regulation of MAPK cascade of GO:0043409 * Changed synonym scope of GO:0043409 from "Related" to "Exact" * Added synonym "down-regulation of MAPK cascade" to GO:0043409 * Added general dbxref GOC:signaling to synonym down-regulation of MAPK cascade of GO:0043409 * Changed synonym scope of GO:0043409 from "Related" to "Exact" * Added synonym "downregulation of MAPK cascade" to GO:0043409 * Added general dbxref GOC:signaling to synonym downregulation of MAPK cascade of GO:0043409 * Changed synonym scope of GO:0043409 from "Related" to "Exact" * Added synonym "inhibition of MAPK cascade" to GO:0043409 * Added general dbxref GOC:signaling to synonym inhibition of MAPK cascade of GO:0043409 * Changed synonym scope of GO:0043409 from "Related" to "Narrow" * Added synonym "negative regulation of MAP kinase cascade" to GO:0043409 * Added general dbxref GOC:signaling to synonym negative regulation of MAP kinase cascade of GO:0043409 * Changed synonym scope of GO:0043409 from "Related" to "Exact" * Added synonym "negative regulation of MAPKKK cascade" to GO:0043409 * Added general dbxref GOC:signaling to synonym negative regulation of MAPKKK cascade of GO:0043409 * Changed synonym scope of GO:0043409 from "Related" to "Exact" * Added synonym "negative regulation of mitogen activated protein kinase cascade" to GO:0043409 * Added general dbxref GOC:signaling to synonym negative regulation of mitogen activated protein kinase cascade of GO:0043409 * Changed synonym scope of GO:0043409 from "Related" to "Exact" * Added synonym "negative regulation of mitogen-activated protein kinase cascade" to GO:0043409 * Added general dbxref GOC:signaling to synonym negative regulation of mitogen-activated protein kinase cascade of GO:0043409 * Changed synonym scope of GO:0043409 from "Related" to "Exact" * Changed name of GO:0043410 from "positive regulation of MAPKKK cascade" to "positive regulation of MAPK cascade" * Added synonym "activation of MAPK cascade" to GO:0043410 * Added general dbxref GOC:signaling to synonym activation of MAPK cascade of GO:0043410 * Changed synonym scope of GO:0043410 from "Related" to "Narrow" * Added synonym "positive regulation of MAP kinase cascade" to GO:0043410 * Added general dbxref GOC:signaling to synonym positive regulation of MAP kinase cascade of GO:0043410 * Changed synonym scope of GO:0043410 from "Related" to "Exact" * Added synonym "positive regulation of MAPKKK cascade" to GO:0043410 * Added general dbxref GOC:signaling to synonym positive regulation of MAPKKK cascade of GO:0043410 * Changed synonym scope of GO:0043410 from "Related" to "Exact" * Added synonym "positive regulation of mitogen-activated protein kinase cascade" to GO:0043410 * Added general dbxref GOC:signaling to synonym positive regulation of mitogen-activated protein kinase cascade of GO:0043410 * Changed synonym scope of GO:0043410 from "Related" to "Exact" * Added synonym "stimulation of MAPK cascade" to GO:0043410 * Added general dbxref GOC:signaling to synonym stimulation of MAPK cascade of GO:0043410 * Changed synonym scope of GO:0043410 from "Related" to "Exact" * Added synonym "up-regulation of MAPK cascade" to GO:0043410 * Added general dbxref GOC:signaling to synonym up-regulation of MAPK cascade of GO:0043410 * Changed synonym scope of GO:0043410 from "Related" to "Exact" * Added synonym "upregulation of MAPK cascade" to GO:0043410 * Added general dbxref GOC:signaling to synonym upregulation of MAPK cascade of GO:0043410 * Changed synonym scope of GO:0043410 from "Related" to "Exact" * Deleted GO:0046318 --OBO_REL:is_a--> GO:0090155 * Created link GO:0046318 -OBO_REL:is_a-> GO:1900060 * Deleted general dbxref KEGG:R04002 from synonym ATP:branched-chain-fatty-acid 1-phosphotransferase activity of GO:0047758 * Added general dbxref EC:2.7.2.14 to synonym ATP:branched-chain-fatty-acid 1-phosphotransferase activity of GO:0047758 * Changed synonym scope of GO:0047758 from "Broad" to "Exact" * Changed comment from "Consider also annotating to 'floral organ development ; GO:0048438' or one of its child terms." to "Consider instead annotating to one of the more specific child terms, or to 'floral organ development ; GO:0048438' or one of its child terms." * Added definition dbxref GOC:PO_curators to GO:0048438 * Added definition dbxref PO:0025023 to GO:0048438 * Added synonym "collective phyllome structure development" to GO:0048438 * Added general dbxref GOC:PO_curators to synonym collective phyllome structure development of GO:0048438 * Added general dbxref PO:0025023 to synonym collective phyllome structure development of GO:0048438 * Changed synonym scope of GO:0048438 from "Related" to "Broad" * Added definition dbxref GOC:PO_curators to GO:0048457 * Added definition dbxref PO:0025023 to GO:0048457 * Added definition dbxref GOC:PO_curators to GO:0048458 * Added definition dbxref PO:0025023 to GO:0048458 * Added definition dbxref GOC:PO_curators to GO:0048459 * Added definition dbxref PO:0025023 to GO:0048459 * Changed synonym scope of GO:0051403 from "Exact" to "Narrow" * Changed synonym scope of GO:0051403 from "Exact" to "Narrow" * Changed definition of GO:0070371 from "A cascade of protein kinase activities, culminating in the phosphorylation and activation of either the ERK1 or ERK2 kinases, which in turn are a subfamily of mitogen-activated protein (MAP) kinases." to "An intracellular protein kinase cascade containing at... 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