[Obo-phenotype-commits] obo/ontology/phenotype/plant_traits plant_trait.obo, 1.400, 1.401 plant_trait_xp-mireot.obo, 1.2, 1.3 plant_trait_xp.obo, 1.21, 1.22

[Chris M. <cmu...@us...>]

Update of /cvsroot/obo/obo/ontology/phenotype/plant_traits
In directory sfp-cvsdas-4.v30.ch3.sourceforge.com:/tmp/cvs-serv9560

Modified Files:
	plant_trait.obo plant_trait_xp-mireot.obo plant_trait_xp.obo 
Log Message:
fixed syntax

Index: plant_trait.obo
===================================================================
RCS file: /cvsroot/obo/obo/ontology/phenotype/plant_traits/plant_trait.obo,v
retrieving revision 1.400
retrieving revision 1.401
diff -C2 -d -r1.400 -r1.401
*** plant_trait.obo	26 Oct 2010 07:02:08 -0000	1.400
--- plant_trait.obo	17 Jan 2011 01:40:49 -0000	1.401
***************
*** 1,6 ****
  format-version: 1.2
! date: 25:10:2010 17:47
! saved-by: jaiswalp
! auto-generated-by: OBO-Edit 2.1-beta4
  default-namespace: plant_trait_ontology
  
--- 1,4 ----
  format-version: 1.2
! date: 16:01:2011 17:39
  default-namespace: plant_trait_ontology
  
***************
*** 557,562 ****
  comment: Does not include traits on fruit, fruit parts and adventitious roots whcih are borne on the shoot.
  is_a: TO:0000017 ! anatomy and morphology related trait
! modified_by: jaiswalp
! modification_date: 2010-10-25T05:36:01Z
  
  [Term]
--- 555,560 ----
  comment: Does not include traits on fruit, fruit parts and adventitious roots whcih are borne on the shoot.
  is_a: TO:0000017 ! anatomy and morphology related trait
! created_by: jaiswalp
! creation_date: 2010-10-25T05:36:01Z
  
  [Term]
***************
*** 1005,1010 ****
  def: "A subjective assessment of the plant in similar site and growing conditions (often unfavorable conditions) based upon a specific facet of growth." [GR:pj]
  is_a: TO:0000387 ! trait ontology
! modified_by: jaiswalp
! modification_date: 2010-10-25T05:27:37Z
  
  [Term]
--- 1003,1008 ----
  def: "A subjective assessment of the plant in similar site and growing conditions (often unfavorable conditions) based upon a specific facet of growth." [GR:pj]
  is_a: TO:0000387 ! trait ontology
! created_by: jaiswalp
! creation_date: 2010-10-25T05:27:37Z
  
  [Term]
***************
*** 1587,1592 ****
  synonym: "LFAG" RELATED []
  is_a: TO:0000419 ! leaf anatomy and morphology trait
! modified_by: jaiswalp
! modification_date: 2010-10-25T05:29:42Z
  
  [Term]
--- 1585,1590 ----
  synonym: "LFAG" RELATED []
  is_a: TO:0000419 ! leaf anatomy and morphology trait
! created_by: jaiswalp
! creation_date: 2010-10-25T05:29:42Z
  
  [Term]
***************
*** 1995,2000 ****
  synonym: "insect resistance" NARROW []
  is_a: TO:0000054 ! animal damage resistance
! modified_by: jaiswalp
! modification_date: 2010-10-25T05:38:56Z
  
  [Term]
--- 1993,1998 ----
  synonym: "insect resistance" NARROW []
  is_a: TO:0000054 ! animal damage resistance
! created_by: jaiswalp
! creation_date: 2010-10-25T05:38:56Z
  
  [Term]
***************
*** 2519,2524 ****
  synonym: "LFCL" RELATED []
  is_a: TO:0000419 ! leaf anatomy and morphology trait
! modified_by: jaiswalp
! modification_date: 2010-10-25T05:13:05Z
  
  [Term]
--- 2517,2522 ----
  synonym: "LFCL" RELATED []
  is_a: TO:0000419 ! leaf anatomy and morphology trait
! created_by: jaiswalp
! creation_date: 2010-10-25T05:13:05Z
  
  [Term]
***************
*** 2774,2779 ****
  def: "Traits associated with observing effects on the development of the plant or plant parts." [GR:pj]
  is_a: TO:0000387 ! trait ontology
! modified_by: jaiswalp
! modification_date: 2010-10-25T05:44:20Z
  
  [Term]
--- 2772,2777 ----
  def: "Traits associated with observing effects on the development of the plant or plant parts." [GR:pj]
  is_a: TO:0000387 ! trait ontology
! created_by: jaiswalp
! creation_date: 2010-10-25T05:44:20Z
  
  [Term]
***************
*** 3004,3009 ****
  def: "It is a controlled vocabulary to describe each trait as a distinguishable feature, characteristic, quality or phenotypic feature of a developing or mature plant." [GR:pj]
  synonym: "TO" RELATED []
! modified_by: jaiswalp
! modification_date: 2010-10-25T04:34:55Z
  
  [Term]
--- 3002,3007 ----
  def: "It is a controlled vocabulary to describe each trait as a distinguishable feature, characteristic, quality or phenotypic feature of a developing or mature plant." [GR:pj]
  synonym: "TO" RELATED []
! created_by: jaiswalp
! creation_date: 2010-10-25T04:34:55Z
  
  [Term]
***************
*** 3244,3249 ****
  def: "Traits associated with changes in the anatomy or structure of the leaf and its parts." [GR:pj]
  is_a: TO:0000077 ! shoot anatomy and morphology trait
! modified_by: jaiswalp
! modification_date: 2010-10-25T05:29:42Z
  
  [Term]
--- 3242,3247 ----
  def: "Traits associated with changes in the anatomy or structure of the leaf and its parts." [GR:pj]
  is_a: TO:0000077 ! shoot anatomy and morphology trait
! created_by: jaiswalp
! creation_date: 2010-10-25T05:29:42Z
  
  [Term]
***************
*** 3590,3595 ****
  comment: May be measured in a dry mass or in a fresh tissue.
  is_a: TO:0000277 ! biochemical trait
! modified_by: jaiswalp
! modification_date: 2010-10-25T05:09:12Z
  
  [Term]
--- 3588,3593 ----
  comment: May be measured in a dry mass or in a fresh tissue.
  is_a: TO:0000277 ! biochemical trait
! created_by: jaiswalp
! creation_date: 2010-10-25T05:09:12Z
  
  [Term]
***************
*** 4517,4522 ****
  def: "Any trait contributing to the overall improvement of the product. Often associated to economical and or commercial importance." [GR:pj]
  is_a: TO:0000387 ! trait ontology
! modified_by: jaiswalp
! modification_date: 2010-10-25T05:45:31Z
  
  [Term]
--- 4515,4520 ----
  def: "Any trait contributing to the overall improvement of the product. Often associated to economical and or commercial importance." [GR:pj]
  is_a: TO:0000387 ! trait ontology
! created_by: jaiswalp
! creation_date: 2010-10-25T05:45:31Z
  
  [Term]
***************
*** 4889,4894 ****
  is_a: TO:0000102 ! phosphorus sensitivity
  is_a: TO:0001024 ! phosphorus content
! modified_by: jaiswalp
! modification_date: 2010-10-25T04:53:00Z
  
  [Term]
--- 4887,4892 ----
  is_a: TO:0000102 ! phosphorus sensitivity
  is_a: TO:0001024 ! phosphorus content
! created_by: jaiswalp
! creation_date: 2010-10-25T04:53:00Z
  
  [Term]
***************
*** 4955,4960 ****
  def: "Traits associated with observing effects on the development of the leaf and its parts." [GR:pj]
  is_a: TO:0000654 ! shoot development trait
! modified_by: jaiswalp
! modification_date: 2010-10-25T05:34:19Z
  
  [Term]
--- 4953,4958 ----
  def: "Traits associated with observing effects on the development of the leaf and its parts." [GR:pj]
  is_a: TO:0000654 ! shoot development trait
! created_by: jaiswalp
! creation_date: 2010-10-25T05:34:19Z
  
  [Term]
***************
*** 5677,5682 ****
  synonym: "PHOCN" RELATED []
  is_a: TO:0000465 ! mineral and ion content related trait
! modified_by: jaiswalp
! modification_date: 2010-10-25T04:52:46Z
  
  [Term]
--- 5675,5680 ----
  synonym: "PHOCN" RELATED []
  is_a: TO:0000465 ! mineral and ion content related trait
! created_by: jaiswalp
! creation_date: 2010-10-25T04:52:46Z
  
  [Term]
***************
*** 5996,6001 ****
  synonym: "leaf margin curvature" RELATED []
  is_a: TO:0000419 ! leaf anatomy and morphology trait
! modified_by: jaiswalp
! modification_date: 2010-10-25T05:30:17Z
  
  [Term]
--- 5994,5999 ----
  synonym: "leaf margin curvature" RELATED []
  is_a: TO:0000419 ! leaf anatomy and morphology trait
! created_by: jaiswalp
! creation_date: 2010-10-25T05:30:17Z
  
  [Term]
***************
*** 6607,6612 ****
  def: "Extent of pubescence  (presence of hairs)  on the leaf surface." [GR:pj]
  is_a: TO:0000419 ! leaf anatomy and morphology trait
! modified_by: jaiswalp
! modification_date: 2010-10-25T05:37:25Z
  
  [Term]
--- 6605,6610 ----
  def: "Extent of pubescence  (presence of hairs)  on the leaf surface." [GR:pj]
  is_a: TO:0000419 ! leaf anatomy and morphology trait
! created_by: jaiswalp
! creation_date: 2010-10-25T05:37:25Z
  
  [Term]
***************
*** 7330,7336 ****
  is_a: TO:0000465 ! mineral and ion content related trait
  created_by: jaiswalp
! creation_date: 2010-10-25T04:38:27Z
! modified_by: jaiswalp
! modification_date: 2010-10-25T04:45:08Z
  
  [Term]
--- 7328,7332 ----
  is_a: TO:0000465 ! mineral and ion content related trait
  created_by: jaiswalp
! creation_date: 2010-10-25T04:45:08Z
  
  [Term]
***************
*** 7340,7346 ****
  is_a: TO:0000465 ! mineral and ion content related trait
  created_by: jaiswalp
! creation_date: 2010-10-25T04:49:08Z
! modified_by: jaiswalp
! modification_date: 2010-10-25T04:49:47Z
  
  [Term]
--- 7336,7340 ----
  is_a: TO:0000465 ! mineral and ion content related trait
  created_by: jaiswalp
! creation_date: 2010-10-25T04:49:47Z
  
  [Term]
***************
*** 7350,7356 ****
  is_a: TO:0000465 ! mineral and ion content related trait
  created_by: jaiswalp
! creation_date: 2010-10-25T04:50:28Z
! modified_by: jaiswalp
! modification_date: 2010-10-25T04:51:17Z
  
  [Term]
--- 7344,7348 ----
  is_a: TO:0000465 ! mineral and ion content related trait
  created_by: jaiswalp
! creation_date: 2010-10-25T04:51:17Z
  
  [Term]
***************
*** 7360,7366 ****
  is_a: TO:0001024 ! phosphorus content
  created_by: jaiswalp
! creation_date: 2010-10-25T04:51:26Z
! modified_by: jaiswalp
! modification_date: 2010-10-25T04:53:00Z
  
  [Term]
--- 7352,7356 ----
  is_a: TO:0001024 ! phosphorus content
  created_by: jaiswalp
! creation_date: 2010-10-25T04:53:00Z
  
  [Term]
***************
*** 7370,7376 ****
  is_a: TO:0000465 ! mineral and ion content related trait
  created_by: jaiswalp
! creation_date: 2010-10-25T04:53:29Z
! modified_by: jaiswalp
! modification_date: 2010-10-25T04:54:02Z
  
  [Term]
--- 7360,7364 ----
  is_a: TO:0000465 ! mineral and ion content related trait
  created_by: jaiswalp
! creation_date: 2010-10-25T04:54:02Z
  
  [Term]
***************
*** 7380,7386 ****
  is_a: TO:0000465 ! mineral and ion content related trait
  created_by: jaiswalp
! creation_date: 2010-10-25T04:54:15Z
! modified_by: jaiswalp
! modification_date: 2010-10-25T04:55:21Z
  
  [Term]
--- 7368,7372 ----
  is_a: TO:0000465 ! mineral and ion content related trait
  created_by: jaiswalp
! creation_date: 2010-10-25T04:55:21Z
  
  [Term]
***************
*** 7390,7396 ****
  is_a: TO:0000465 ! mineral and ion content related trait
  created_by: jaiswalp
! creation_date: 2010-10-25T04:55:34Z
! modified_by: jaiswalp
! modification_date: 2010-10-25T04:56:23Z
  
  [Term]
--- 7376,7380 ----
  is_a: TO:0000465 ! mineral and ion content related trait
  created_by: jaiswalp
! creation_date: 2010-10-25T04:56:23Z
  
  [Term]
***************
*** 7400,7406 ****
  is_a: TO:0000465 ! mineral and ion content related trait
  created_by: jaiswalp
! creation_date: 2010-10-25T04:56:30Z
! modified_by: jaiswalp
! modification_date: 2010-10-25T04:56:58Z
  
  [Term]
--- 7384,7388 ----
  is_a: TO:0000465 ! mineral and ion content related trait
  created_by: jaiswalp
! creation_date: 2010-10-25T04:56:58Z
  
  [Term]
***************
*** 7410,7416 ****
  is_a: TO:0000465 ! mineral and ion content related trait
  created_by: jaiswalp
! creation_date: 2010-10-25T04:57:41Z
! modified_by: jaiswalp
! modification_date: 2010-10-25T04:58:19Z
  
  [Term]
--- 7392,7396 ----
  is_a: TO:0000465 ! mineral and ion content related trait
  created_by: jaiswalp
! creation_date: 2010-10-25T04:58:19Z
  
  [Term]
***************
*** 7420,7426 ****
  is_a: TO:0000465 ! mineral and ion content related trait
  created_by: jaiswalp
! creation_date: 2010-10-25T04:58:31Z
! modified_by: jaiswalp
! modification_date: 2010-10-25T04:59:07Z
  
  [Term]
--- 7400,7404 ----
  is_a: TO:0000465 ! mineral and ion content related trait
  created_by: jaiswalp
! creation_date: 2010-10-25T04:59:07Z
  
  [Term]
***************
*** 7430,7436 ****
  is_a: TO:0000465 ! mineral and ion content related trait
  created_by: jaiswalp
! creation_date: 2010-10-25T04:59:17Z
! modified_by: jaiswalp
! modification_date: 2010-10-25T05:04:19Z
  
  [Term]
--- 7408,7412 ----
  is_a: TO:0000465 ! mineral and ion content related trait
  created_by: jaiswalp
! creation_date: 2010-10-25T05:04:19Z
  
  [Term]
***************
*** 7440,7446 ****
  is_a: TO:0000465 ! mineral and ion content related trait
  created_by: jaiswalp
! creation_date: 2010-10-25T04:59:26Z
! modified_by: jaiswalp
! modification_date: 2010-10-25T05:07:19Z
  
  [Term]
--- 7416,7420 ----
  is_a: TO:0000465 ! mineral and ion content related trait
  created_by: jaiswalp
! creation_date: 2010-10-25T05:07:19Z
  
  [Term]
***************
*** 7450,7456 ****
  is_a: TO:0000465 ! mineral and ion content related trait
  created_by: jaiswalp
! creation_date: 2010-10-25T04:59:32Z
! modified_by: jaiswalp
! modification_date: 2010-10-25T05:07:53Z
  
  [Term]
--- 7424,7428 ----
  is_a: TO:0000465 ! mineral and ion content related trait
  created_by: jaiswalp
! creation_date: 2010-10-25T05:07:53Z
  
  [Term]
***************
*** 7460,7466 ****
  is_a: TO:0000465 ! mineral and ion content related trait
  created_by: jaiswalp
! creation_date: 2010-10-25T04:59:38Z
! modified_by: jaiswalp
! modification_date: 2010-10-25T05:08:21Z
  
  [Term]
--- 7432,7436 ----
  is_a: TO:0000465 ! mineral and ion content related trait
  created_by: jaiswalp
! creation_date: 2010-10-25T05:08:21Z
  
  [Term]
***************
*** 7470,7476 ****
  is_a: TO:0000465 ! mineral and ion content related trait
  created_by: jaiswalp
! creation_date: 2010-10-25T04:59:53Z
! modified_by: jaiswalp
! modification_date: 2010-10-25T05:09:00Z
  
  [Term]
--- 7440,7444 ----
  is_a: TO:0000465 ! mineral and ion content related trait
  created_by: jaiswalp
! creation_date: 2010-10-25T05:09:00Z
  
  [Term]
***************
*** 7480,7486 ****
  is_a: TO:0006052 ! copper concentration
  created_by: jaiswalp
! creation_date: 2010-10-25T05:04:14Z
! modified_by: jaiswalp
! modification_date: 2010-10-25T05:06:37Z
  
  [Term]
--- 7448,7452 ----
  is_a: TO:0006052 ! copper concentration
  created_by: jaiswalp
! creation_date: 2010-10-25T05:06:37Z
  
  [Term]
***************
*** 7490,7496 ****
  is_a: TO:0006052 ! copper concentration
  created_by: jaiswalp
! creation_date: 2010-10-25T05:04:19Z
! modified_by: jaiswalp
! modification_date: 2010-10-25T05:06:46Z
  
  [Term]
--- 7456,7460 ----
  is_a: TO:0006052 ! copper concentration
  created_by: jaiswalp
! creation_date: 2010-10-25T05:06:46Z
  
  [Term]
***************
*** 7500,7506 ****
  is_a: TO:0000465 ! mineral and ion content related trait
  created_by: jaiswalp
! creation_date: 2010-10-25T05:09:12Z
! modified_by: jaiswalp
! modification_date: 2010-10-25T05:09:41Z
  
  [Term]
--- 7464,7468 ----
  is_a: TO:0000465 ! mineral and ion content related trait
  created_by: jaiswalp
! creation_date: 2010-10-25T05:09:41Z
  
  [Term]
***************
*** 7510,7516 ****
  is_a: TO:0000326 ! leaf color
  created_by: jaiswalp
! creation_date: 2010-10-25T05:13:05Z
! modified_by: jaiswalp
! modification_date: 2010-10-25T05:18:43Z
  
  [Term]
--- 7472,7476 ----
  is_a: TO:0000326 ! leaf color
  created_by: jaiswalp
! creation_date: 2010-10-25T05:18:43Z
  
  [Term]
***************
*** 7520,7526 ****
  is_a: TO:0000357 ! growth and development trait
  created_by: jaiswalp
! creation_date: 2010-10-25T05:23:52Z
! modified_by: jaiswalp
! modification_date: 2010-10-25T05:27:03Z
  
  [Term]
--- 7480,7484 ----
  is_a: TO:0000357 ! growth and development trait
  created_by: jaiswalp
! creation_date: 2010-10-25T05:27:03Z
  
  [Term]
***************
*** 7530,7536 ****
  is_a: TO:0000133 ! stature or vigor trait
  created_by: jaiswalp
! creation_date: 2010-10-25T05:27:37Z
! modified_by: jaiswalp
! modification_date: 2010-10-25T05:28:44Z
  
  [Term]
--- 7488,7492 ----
  is_a: TO:0000133 ! stature or vigor trait
  created_by: jaiswalp
! creation_date: 2010-10-25T05:28:44Z
  
  [Term]
***************
*** 7540,7546 ****
  is_a: TO:0002635 ! leaf margin trait
  created_by: jaiswalp
! creation_date: 2010-10-25T05:30:17Z
! modified_by: jaiswalp
! modification_date: 2010-10-25T05:32:43Z
  
  [Term]
--- 7496,7500 ----
  is_a: TO:0002635 ! leaf margin trait
  created_by: jaiswalp
! creation_date: 2010-10-25T05:32:43Z
  
  [Term]
***************
*** 7550,7556 ****
  is_a: TO:0000655 ! leaf development trait
  created_by: jaiswalp
! creation_date: 2010-10-25T05:34:19Z
! modified_by: jaiswalp
! modification_date: 2010-10-25T05:34:54Z
  
  [Term]
--- 7504,7508 ----
  is_a: TO:0000655 ! leaf development trait
  created_by: jaiswalp
! creation_date: 2010-10-25T05:34:54Z
  
  [Term]
***************
*** 7560,7566 ****
  is_a: TO:0000077 ! shoot anatomy and morphology trait
  created_by: jaiswalp
! creation_date: 2010-10-25T05:36:01Z
! modified_by: jaiswalp
! modification_date: 2010-10-25T05:36:54Z
  
  [Term]
--- 7512,7516 ----
  is_a: TO:0000077 ! shoot anatomy and morphology trait
  created_by: jaiswalp
! creation_date: 2010-10-25T05:36:54Z
  
  [Term]
***************
*** 7570,7576 ****
  is_a: TO:0002722 ! leaf pubescence
  created_by: jaiswalp
! creation_date: 2010-10-25T05:37:25Z
! modified_by: jaiswalp
! modification_date: 2010-10-25T05:38:08Z
  
  [Term]
--- 7520,7524 ----
  is_a: TO:0002722 ! leaf pubescence
  created_by: jaiswalp
! creation_date: 2010-10-25T05:38:08Z
  
  [Term]
***************
*** 7581,7587 ****
  is_a: TO:0000261 ! insect damage resistance
  created_by: jaiswalp
! creation_date: 2010-10-25T05:38:56Z
! modified_by: jaiswalp
! modification_date: 2010-10-25T05:41:32Z
  
  [Term]
--- 7529,7533 ----
  is_a: TO:0000261 ! insect damage resistance
  created_by: jaiswalp
! creation_date: 2010-10-25T05:41:32Z
  
  [Term]
***************
*** 7592,7598 ****
  is_a: TO:0000357 ! growth and development trait
  created_by: jaiswalp
! creation_date: 2010-10-25T05:42:12Z
! modified_by: jaiswalp
! modification_date: 2010-10-25T05:46:42Z
  
  [Term]
--- 7538,7542 ----
  is_a: TO:0000357 ! growth and development trait
  created_by: jaiswalp
! creation_date: 2010-10-25T05:46:42Z
  
  [Term]
***************
*** 7603,7609 ****
  is_a: TO:0000357 ! growth and development trait
  created_by: jaiswalp
! creation_date: 2010-10-25T05:44:20Z
! modified_by: jaiswalp
! modification_date: 2010-10-25T05:46:19Z
  
  [Term]
--- 7547,7551 ----
  is_a: TO:0000357 ! growth and development trait
  created_by: jaiswalp
! creation_date: 2010-10-25T05:46:19Z
  
  [Term]

Index: plant_trait_xp-mireot.obo
===================================================================
RCS file: /cvsroot/obo/obo/ontology/phenotype/plant_traits/plant_trait_xp-mireot.obo,v
retrieving revision 1.2
retrieving revision 1.3
diff -C2 -d -r1.2 -r1.3
*** plant_trait_xp-mireot.obo	28 Jun 2010 22:45:27 -0000	1.2
--- plant_trait_xp-mireot.obo	17 Jan 2011 01:40:49 -0000	1.3
***************
*** 12809,12820 ****
--- 12809,12823 ----
  [Typedef]
  id: OBO_REL:inheres_in
+ name: inheres_in
  namespace: plant_trait_xp
  
  [Typedef]
  id: OBO_REL:relative_to
+ name: relative_to
  namespace: plant_trait_xp
  
  [Typedef]
  id: OBO_REL:towards
+ name: towards
  namespace: plant_trait_xp
  

Index: plant_trait_xp.obo
===================================================================
RCS file: /cvsroot/obo/obo/ontology/phenotype/plant_traits/plant_trait_xp.obo,v
retrieving revision 1.21
retrieving revision 1.22
diff -C2 -d -r1.21 -r1.22
*** plant_trait_xp.obo	26 Jul 2010 10:39:21 -0000	1.21
--- plant_trait_xp.obo	17 Jan 2011 01:40:49 -0000	1.22
***************
*** 1,14 ****
! format-version: 1.2
! date: 21:05:2007 13:55
  saved-by: George Gkoutos
  default-namespace: plant_trait_xp
! id-mapping: during OBO_REL:during
! id-mapping: towards OBO_REL:towards
! id-mapping: relative_to OBO_REL:relative_to
! id-mapping: inheres_in OBO_REL:inheres_in
! remark: Status: ALPHA
! ! input: plant_trait_xp.obo
  
- ! input: plant_trait_xp.obo
  [Term]
  id: TO:0000001 ! carbon sensitivity
--- 1,7 ----
! format-version: 1.4
  saved-by: George Gkoutos
  default-namespace: plant_trait_xp
! ontology: to/to-equivalence-axioms
  
  [Term]
  id: TO:0000001 ! carbon sensitivity
***************
*** 481,489 ****
  
  [Term]
- id: TO:0000190 ! seed coat color
- intersection_of: PATO:0000333 ! spotted
- intersection_of: inheres_in PO:0009088 ! seed coat
- 
- [Term]
  id: TO:0000193 ! embryo shape
  intersection_of: PATO:0000052 ! shape
--- 474,477 ----
***************
*** 816,820 ****
  id: TO:0000333 ! sugar content ! sugar content
  intersection_of: PATO:0000070 ! presence or absence in organism
! intersection_of: OBO_REL:towards CHEBI:16646 ! sugar
  
  [Term]
--- 804,808 ----
  id: TO:0000333 ! sugar content ! sugar content
  intersection_of: PATO:0000070 ! presence or absence in organism
! intersection_of: towards CHEBI:16646 ! sugar
  
  [Term]
***************
*** 919,922 ****
--- 907,911 ----
  intersection_of: relative_to PATO:0000921 ! width
  
+ 
  [Term]
  id: TO:0000417 ! lemma and palea pubescence
***************
*** 934,938 ****
  intersection_of: inheres_in PO:0009011 ! plant structure
  
- !TODO
  ![Term]
  !id: TO:0000426 ! internode color
--- 923,926 ----
***************
*** 996,1000 ****
  id: TO:0000472 ! vascular bundle number ! vascular bundle number
  intersection_of: PATO:0001555 ! has or lacks parts of type
! intersection_of: OBO_REL:towards PO:0005020 ! vascular bundle
  
  [Term]
--- 984,988 ----
  id: TO:0000472 ! vascular bundle number ! vascular bundle number
  intersection_of: PATO:0001555 ! has or lacks parts of type
! intersection_of: towards PO:0005020 ! vascular bundle
  
  [Term]
***************
*** 1768,1777 ****
  id: TO:0002662 ! leaf rolling tolerance ! leaf rolling tolerance
  intersection_of: PATO:0000515 ! tolerant to
! intersection_of: OBO_REL:towards TO:0000085 ! leaf rolling
  
  [Term]
  id: TO:0002663 ! leaf necrosis tolerance ! leaf necrosis tolerance
  intersection_of: PATO:0000515 ! tolerant to
! intersection_of: OBO_REL:towards TO:0000652 ! leaf necrosis
  
  [Term]
--- 1756,1765 ----
  id: TO:0002662 ! leaf rolling tolerance ! leaf rolling tolerance
  intersection_of: PATO:0000515 ! tolerant to
! intersection_of: towards TO:0000085 ! leaf rolling
  
  [Term]
  id: TO:0002663 ! leaf necrosis tolerance ! leaf necrosis tolerance
  intersection_of: PATO:0000515 ! tolerant to
! intersection_of: towards TO:0000652 ! leaf necrosis
  
  [Term]
***************
*** 1793,1797 ****
  id: TO:0002670 ! momilactone A content ! momilactone A content
  intersection_of: PATO:0000070 ! presence or absence in organism
! intersection_of: OBO_REL:towards CHEBI:49191 ! momilactone A
  
  [Term]
--- 1781,1785 ----
  id: TO:0002670 ! momilactone A content ! momilactone A content
  intersection_of: PATO:0000070 ! presence or absence in organism
! intersection_of: towards CHEBI:49191 ! momilactone A
  
  [Term]
***************
*** 1953,1958 ****
  id: TO:0002738 ! floret number per inflorescence
  intersection_of: PATO:0001555 ! has or lacks parts of type
! intersection_of: OBO_REL:inheres_in PO:0009049 ! inflorescence
! intersection_of: OBO_REL:towards PO:0009082 ! floret
  
  [Term]
--- 1941,1946 ----
  id: TO:0002738 ! floret number per inflorescence
  intersection_of: PATO:0001555 ! has or lacks parts of type
! intersection_of: inheres_in PO:0009049 ! inflorescence
! intersection_of: towards PO:0009082 ! floret
  
  [Term]
***************
*** 2084,2089 ****
  id: TO:0006033 ! floret number per spikelet
  intersection_of: PATO:0001555 ! has or lacks parts of type
! intersection_of: OBO_REL:inheres_in PO:0009051 ! spikelet
! intersection_of: OBO_REL:towards PO:0009082 ! floret
  
  [Term]
--- 2072,2077 ----
  id: TO:0006033 ! floret number per spikelet
  intersection_of: PATO:0001555 ! has or lacks parts of type
! intersection_of: inheres_in PO:0009051 ! spikelet
! intersection_of: towards PO:0009082 ! floret
  
  [Term]
***************
*** 2107,2119 ****
  intersection_of: inheres_in PO:0009033 ! tepal
  
  [Typedef]
  id: relative_to
  
  [Typedef]
  id: inheres_in
  
  [Typedef]
! id: towards
  
  
  
--- 2095,2210 ----
  intersection_of: inheres_in PO:0009033 ! tepal
  
+ [Term]
+ id: TO:0000019 ! seedling height
+ intersection_of: PATO:0000119 ! height
+ intersection_of: inheres_in PO:0008037 ! seedling
+ 
+ [Term]
+ id: TO:0000587 ! endosperm quality
+ intersection_of: TO:0000597 ! quality trait
+ intersection_of: inheres_in PO:0009089 ! endosperm
+ 
+ [Term]
+ id: TO:0002728 ! fruit quality trait
+ intersection_of: TO:0000597 ! quality trait
+ intersection_of: inheres_in PO:0009001 ! fruit
+ 
+ [Term]
+ id: TO:0005007 ! glufosinate sensitivity
+ intersection_of: PATO:0000085 ! sensitivity toward
+ intersection_of: inheres_in CHEBI:52136 ! phosphinothricin
+ 
+ [Term]
+ id: TO:0011003 ! inflorescence axis color
+ intersection_of: PATO:0000014 ! color
+ intersection_of: inheres_in PO:0020122 ! inflorescence axis
+ 
+ [Term]
+ id: TO:0011004 ! inflorescence branch color
+ intersection_of: PATO:0000014 ! color
+ intersection_of: inheres_in PO:0009081 ! inflorescence branch
+ 
+ [Term]
+ id: TO:0011008 ! stigma length
+ intersection_of: PATO:0000122 ! length
+ intersection_of: inheres_in PO:0009073 ! stigma
+ 
+ [Term]
+ id: TO:0011009 ! style length
+ intersection_of: PATO:0000122 ! length
+ intersection_of: inheres_in PO:0009074 ! style
+ 
+ [Term]
+ id: TO:0020016 ! seed texture
+ intersection_of: PATO:0000150 ! texture
+ intersection_of: inheres_in PO:0009010 ! seed
+ 
+ [Term]
+ id: TO:0020033 ! glume length
+ intersection_of: PATO:0000122 ! length
+ intersection_of: inheres_in PO:0009039 ! glume
+ 
  [Typedef]
  id: relative_to
+ name: relative_to
+ 
+ 
+ ! map this to 'depends on'
+ [Typedef]
+ id: towards
+ name: towards
+ xref: BFO:0000070
+ 
+ [Typedef]
+ id: part_of
+ name: part of
+ xref: BFO:0000050
+ 
+ [Typedef]
+ id: has_part
+ name: has part
+ xref: BFO:0000051
+ 
+ [Typedef]
+ id: has_granular_part
+ name: has granular part
+ xref: BFO:0000071
+ 
+ [Typedef]
+ id: results_in
+ name: results in
+ 
+ [Typedef]
+ id: occurs_in
+ name: occurs in
+ xref: BFO:0000066
+ 
+ [Typedef]
+ id: inheres_in_part_of
+ name: inheres in part of
+ holds_over_chain: inheres_in part_of
  
  [Typedef]
  id: inheres_in
+ name: inheres in
+ is_a: inheres_in_part_of
+ xref: BFO:0000052
  
  [Typedef]
! id: qualifier
! name: qualifier
  
+ [Typedef]
+ id: phenotype_of
+ name: phenotype of
+ xref: RO:0002201
  
+ [Typedef]
+ id: bearer_of
+ name: bearer of
+ xref: BFO:0000053
  
+ [Typedef]
+ id: has_participant
+ name: has participant
+ xref: BFO:0000057