Menu
▾
▴
[Obo-phenotype-commits] obo/ontology/phenotype human_disease.obo, 1.180, 1.181 mosquito_insecticide_resistance.obo, 1.794, 1.795 worm_phenotype.obo, 1.120, 1.121
|
From: Seth C. <sjc...@us...> - 2010-04-23 07:02:29
|
Update of /cvsroot/obo/obo/ontology/phenotype In directory sfp-cvsdas-4.v30.ch3.sourceforge.com:/tmp/cvs-serv24831/phenotype Modified Files: human_disease.obo mosquito_insecticide_resistance.obo worm_phenotype.obo Log Message: Automated file update Index: human_disease.obo =================================================================== RCS file: /cvsroot/obo/obo/ontology/phenotype/human_disease.obo,v retrieving revision 1.180 retrieving revision 1.181 diff -C2 -d -r1.180 -r1.181 *** human_disease.obo 22 Apr 2010 07:02:21 -0000 1.180 --- human_disease.obo 23 Apr 2010 07:02:13 -0000 1.181 *************** *** 1,4 **** format-version: 1.2 ! date: 21:04:2010 16:23 saved-by: laronhughes auto-generated-by: OBO-Edit 2.1-beta3 --- 1,4 ---- format-version: 1.2 ! date: 22:04:2010 16:45 saved-by: laronhughes auto-generated-by: OBO-Edit 2.1-beta3 *************** [...1708 lines suppressed...] xref: UMLS_ST:T047 ! is_a: DOID:457 ! Ascaridida infectious disease is_a: DOID:932 ! animal helminthiasis [Term] id: DOID:9792 name: tuberculoma of meninges, bacteriological or histological examination not done *************** *** 493138,493142 **** [Term] id: DOID:9860 ! name: malignant retroperitoneal tumor synonym: "malignant neoplasm of retroperitoneum" EXACT [ICD9CM_2006:158.0] synonym: "malignant neoplasm of retroperitoneum NOS (disorder)" EXACT [SNOMEDCT_2005_07_31:187805006] --- 493186,493190 ---- [Term] id: DOID:9860 ! name: malignant retroperitoneal cancer synonym: "malignant neoplasm of retroperitoneum" EXACT [ICD9CM_2006:158.0] synonym: "malignant neoplasm of retroperitoneum NOS (disorder)" EXACT [SNOMEDCT_2005_07_31:187805006] Index: worm_phenotype.obo =================================================================== RCS file: /cvsroot/obo/obo/ontology/phenotype/worm_phenotype.obo,v retrieving revision 1.120 retrieving revision 1.121 diff -C2 -d -r1.120 -r1.121 *** worm_phenotype.obo 21 Apr 2010 07:02:15 -0000 1.120 --- worm_phenotype.obo 23 Apr 2010 07:02:17 -0000 1.121 *************** *** 1,4 **** format-version: 1.2 ! date: 20:04:2010 16:29 saved-by: garys auto-generated-by: OBO-Edit 1.002 --- 1,4 ---- format-version: 1.2 ! date: 22:04:2010 12:27 saved-by: garys auto-generated-by: OBO-Edit 1.002 *************** *** 204,208 **** def: "Animals are unable to take up or store lipids. In C. elegans, this defect results in pale, skinny and arrested larva." [GO:0006629, WB:WBPaper00005707, WB:WBPerson712] synonym: "fat_depleted" RELATED [] ! synonym: "Lpd" RELATED [] is_a: WBPhenotype:0001183 ! fat_content_reduced --- 204,208 ---- def: "Animals are unable to take up or store lipids. In C. elegans, this defect results in pale, skinny and arrested larva." [GO:0006629, WB:WBPaper00005707, WB:WBPerson712] synonym: "fat_depleted" RELATED [] ! synonym: "Lpd" BROAD three_letter_name [] is_a: WBPhenotype:0001183 ! fat_content_reduced *************** *** 1685,1688 **** --- 1685,1689 ---- name: defecation_cycle_variant def: "Any variation in the stereotyped sequence of muscle contractions that result in defecation over a fixed time period compared to control . " [WB:WBPerson2021, WB:WBPerson557] + synonym: "Dec" RELATED [] synonym: "defecation_cycle_abnormal" NARROW [] is_a: WBPhenotype:0000650 ! defecation_variant *************** *** 5109,5113 **** def: "Animals exhibit variations in any processes that lead to the successful transfer of sperm from one organism to another." [GO:0007620, WB:cab] subset: phenotype_slim_wb - synonym: "Cod" BROAD three_letter_name [] synonym: "copulation_abnormal" NARROW [] is_a: WBPhenotype:0000525 ! organism_behavior_variant --- 5110,5113 ---- *************** *** 5118,5121 **** --- 5118,5122 ---- name: male_mating_variant def: "Any varaition in the specific actions or reactions of the male that are associated with reproduction compared to control." [GO:0060179, WB:cab] + synonym: "Cod" BROAD three_letter_name [] synonym: "male_mating_abnormal" NARROW [] is_a: WBPhenotype:0000647 ! copulation_variant *************** *** 5249,5252 **** --- 5250,5254 ---- name: osmotic_avoidance_variant def: "Animals exhibit variations in the avoidance response to solutions of a particular osmotic strength compared to control. In C. elegans, animals typically avoid solutions of high osmotic strength." [WB:WBPerson2021] + synonym: "Osm" RELATED [] synonym: "osmotic_avoidance_abnormal" NARROW [] is_a: WBPhenotype:0000481 ! negative_chemotaxis_variant *************** *** 8054,8058 **** def: "Unclassified abnormality in the inviable one- to four-cell embryo." [WB:cab] synonym: "Emb" BROAD three_letter_name [] ! synonym: "Oth" RELATED [] synonym: "other_abnormal" NARROW [] is_a: WBPhenotype:0001100 ! early_embryonic_lethal --- 8056,8060 ---- def: "Unclassified abnormality in the inviable one- to four-cell embryo." [WB:cab] synonym: "Emb" BROAD three_letter_name [] ! synonym: "Oth" BROAD three_letter_name [] synonym: "other_abnormal" NARROW [] is_a: WBPhenotype:0001100 ! early_embryonic_lethal *************** *** 8162,8166 **** def: " Animals die during the final stages of embryogenesis. In C. elegans, this lethality refers to death during the last (3-fold) stage of embryogenesis, which normally occurs 620-800 min after the first cleavage at 20C, the stage after elongation." [WB:WBPerson101] synonym: "Emb" BROAD three_letter_name [] ! synonym: "Led" RELATED [] is_a: WBPhenotype:0000050 ! embryonic_lethal --- 8164,8168 ---- def: " Animals die during the final stages of embryogenesis. In C. elegans, this lethality refers to death during the last (3-fold) stage of embryogenesis, which normally occurs 620-800 min after the first cleavage at 20C, the stage after elongation." [WB:WBPerson101] synonym: "Emb" BROAD three_letter_name [] ! synonym: "Led" BROAD three_letter_name [] is_a: WBPhenotype:0000050 ! embryonic_lethal *************** *** 11317,11320 **** --- 11319,11323 ---- name: male_mating_defective def: "Males exhibit defects in the specific actions or reactions that are associated with reproduction." [GO:0060179, WB:WBPerson2021, WB:WBPerson557] + synonym: "Cod" BROAD three_letter_name [] is_a: WBPhenotype:0000648 ! male_mating_variant *************** *** 11478,11481 **** --- 11481,11485 ---- name: chemotaxis_variant def: "Any variation in the directed movement of a worm in response to a specific chemical concentration gradient compared to control. Directed movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis)." [GO:0006935, WB:cab] + synonym: "Che" RELATED [] synonym: "chemotaxis_abnormal" NARROW [] is_a: WBPhenotype:0001040 ! chemosensory_response_variant *************** *** 13479,13483 **** name: surface_antigenicity_variant def: "Cuticles of animals or cuticular extracts exhibit an altered pattern of antibody binding compared to Bristol N2 animals of the same developmental stage." [WB:WBPaper00001280, WB:WBPerson712] ! synonym: "Srf" EXACT [] synonym: "surface_antigenicity_abnormal" NARROW [] is_a: WBPhenotype:0001688 ! surface_coat_variant --- 13483,13487 ---- name: surface_antigenicity_variant def: "Cuticles of animals or cuticular extracts exhibit an altered pattern of antibody binding compared to Bristol N2 animals of the same developmental stage." [WB:WBPaper00001280, WB:WBPerson712] ! synonym: "Srf" BROAD three_letter_name [] synonym: "surface_antigenicity_abnormal" NARROW [] is_a: WBPhenotype:0001688 ! surface_coat_variant *************** *** 13488,13492 **** name: surface_coat_variant def: "The electron dense, amorphous envelope that comprises the outermost layer of the cuticle varies in composition from that observed in control animals of the same developmental stage. The integrity of the surface coat is often revealed by an altered antigenicity or biochemical make up." [GO:0060104] ! synonym: "Srf" EXACT [] synonym: "surface_coat_abnormal" NARROW [] is_a: WBPhenotype:0000201 ! cuticle_development_variant --- 13492,13496 ---- name: surface_coat_variant def: "The electron dense, amorphous envelope that comprises the outermost layer of the cuticle varies in composition from that observed in control animals of the same developmental stage. The integrity of the surface coat is often revealed by an altered antigenicity or biochemical make up." [GO:0060104] ! synonym: "Srf" BROAD [] synonym: "surface_coat_abnormal" NARROW [] is_a: WBPhenotype:0000201 ! cuticle_development_variant |