Revision: 2967
http://obo.svn.sourceforge.net/obo/?rev=2967&view=rev
Author: cmungall
Date: 2009-12-20 02:43:54 +0000 (Sun, 20 Dec 2009)
Log Message:
-----------
Modified Paths:
--------------
OBD-PKB/trunk/Makefile
OBD-PKB/trunk/PKB-pkb_db.pro
Modified: OBD-PKB/trunk/Makefile
===================================================================
--- OBD-PKB/trunk/Makefile 2009-12-19 22:37:30 UTC (rev 2966)
+++ OBD-PKB/trunk/Makefile 2009-12-20 02:43:54 UTC (rev 2967)
@@ -119,8 +119,9 @@
pkb-all-by-all.txt:
blip -i PKB-pkb_db.pro $(PKB_OWLPL_INC) -u pkb_to_phenotype -u phenoblast -u blipkit_phenotype phenotype-all-by-all > $@
+#DEBUG = -debug phenotype -debug phenoblast -debug reasoner
pkb-all-by-all.phenotype_db\:pro:
- blip -i PKB-pkb_db.pro $(PKB_OWLPL_INC) -u pkb_to_phenotype -u phenoblast -u blipkit_phenotype phenotype-all-by-all -to pro > $@.tmp && mv $@.tmp $@
+ blip $(DEBUG) -i PKB-pkb_db.pro $(PKB_OWLPL_INC) -u pkb_to_phenotype -u phenoblast -u blipkit_phenotype phenotype-all-by-all -to pro > $@.tmp && mv $@.tmp $@
# so we can keep the old one around...
new-pkb-all-by-all.phenotype_db\:pro:
Modified: OBD-PKB/trunk/PKB-pkb_db.pro
===================================================================
--- OBD-PKB/trunk/PKB-pkb_db.pro 2009-12-19 22:37:30 UTC (rev 2966)
+++ OBD-PKB/trunk/PKB-pkb_db.pro 2009-12-20 02:43:54 UTC (rev 2967)
@@ -2959,52 +2959,22 @@
pkb_db:organism_phenotype_inst('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090201_406', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1860313010_410', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002002_408', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_subcell_20090205_409', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao101633890_407')).
pkb_db:organism_phenotype_inst('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090201_406', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1417703748_416', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002002_417', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_subcell_20090205_418', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_2668_415')).
pkb_db:organism_phenotype_inst('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#ndpo_338_13', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1417703748_161', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002002_162', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao8663416959_163', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_789_160')).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090704_455', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_379', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao313023570_380', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090704_455', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_337', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao313023570_339', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090704_455', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_331', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao313023570_332', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090704_455', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_385', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao120573470_386', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090204_214', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002002_279', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1394521419_280', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_147_24', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_28', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao120573470_29', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_147_24', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002001_25', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1417703748_26', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090202_440', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_463', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1394521419_464', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090202_440', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002002_443', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1394521419_444', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090202_440', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_491', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1417703748_492', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090202_440', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_468', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nifext_170_4', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090202_440', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002002_441', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao471310941_442', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090202_440', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_476', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao2409833926_477', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090202_440', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002002_501', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao313023570_502', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090202_440', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_488', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1417703748_489', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090702_98', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_106', -, -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090702_98', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_99', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1417703748_100', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090702_98', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_103', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao120573470_104', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090702_1', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_57', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao120573470_58', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090702_1', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002001_2', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1417703748_4', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090707_459', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002001_340', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nifext_5198_341', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090707_459', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002001_392', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#CHEBI_15422_393', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090707_459', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002001_394', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1860313010_445', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090707_459', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_52', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1417703748_345', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090706_456', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002001_416', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao5051906853_413', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090706_456', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_352', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1615953555_353', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090706_456', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002001_418', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1860313010_437', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090205_109', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002001_114', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1233810115_115', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090803_64', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001905_65', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1417703748_66', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090205_53', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_13', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_mol_20090302_14', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090205_53', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_41', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1770195789_42', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090702_509', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_64', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1417703748_65', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090702_509', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_59', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao101633890_60', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090702_509', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002001_510', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1417703748_511', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090702_471', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_472', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao2007137787_473', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090702_471', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_477', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1044911821_478', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090706_457', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_399', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1860313010_400', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090706_457', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_407', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1860313010_408', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090706_457', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002001_410', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1417703748_411', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090203_587', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002002_631', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1394521419_632', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090706_488', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_441', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao313023570_442', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090706_488', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_492', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao313023570_493', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090706_488', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_483', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao313023570_484', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090706_488', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_487', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao313023570_76', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090706_488', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_444', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao313023570_445', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_639_27', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_34', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao120573470_35', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_639_27', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002001_39', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao2007137787_38', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090703_454', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002001_395', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1417703748_396', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090805_497', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0000050_502', -, -)).
@@ -3013,38 +2983,19 @@
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090201_2', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002002_402', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1316272517_403', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090201_2', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002001_7', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1044911821_8', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090804_68', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002001_69', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1417703748_70', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_147_504', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_521', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao101633890_522', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_147_504', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_518', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1417703748_519', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_147_504', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002001_505', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1417703748_506', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_147_400', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_401', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1417703748_402', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090205_743', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_35', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao120573470_36', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090205_743', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_31', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao120573470_32', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090205_743', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_32', -, -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090702_449', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_50', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao5651809446_351', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090702_449', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_330', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1417703748_331', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090702_449', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_334', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao120573470_335', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090702_449', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_365', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1417703748_366', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090702_449', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_55', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao120573470_353', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090702_449', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002000_345', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1417703748_347', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090702_449', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_375', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao120573470_376', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090702_449', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_46', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1417703748_346', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090708_91', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001905_92', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao120573470_93', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_147_9', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002001_13', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1417703748_14', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_147_9', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_10', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao120573470_11', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090801_60', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002001_61', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1417703748_62', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_147_336', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002001_337', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1417703748_338', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090801_11', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002002_16', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao120573470_17', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090801_11', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_56', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao120573470_57', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090703_513', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_71', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao101633890_72', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090703_513', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_68', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1417703748_69', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090703_513', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002001_514', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1417703748_515', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090803_72', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001905_73', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1233810115_74', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090803_72', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002002_84', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao120573470_86', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_147_343', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002001_346', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1417703748_344', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_147_343', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002001_376', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1417703748_377', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_147_343', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_397', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao120573470_398', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_147_367', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002037_368', -, -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_147_367', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_371', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao120573470_372', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_147_367', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002001_375', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1417703748_376', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#ndpo_340_7', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#Braak_Stage_6_125', -, -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090202_521', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002002_527', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_mol_20090203_528', -)).
@@ -3054,21 +3005,15 @@
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090702_60', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001905_62', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1417703748_63', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090702_60', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0000461_61', -, -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090702_451', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002001_433', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1417703748_434', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090702_451', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_462', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1044911821_463', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090702_451', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_466', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao2007137787_467', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090804_76', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002001_77', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1233810115_78', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090804_76', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001905_88', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao120573470_90', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090703_453', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002001_8', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1417703748_360', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090703_452', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002000_357', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1417703748_358', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#ndpo_340_6', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#Braak_Stage_1_99', -, -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090706_458', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_419', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao333328131_420', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090702_448', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002001_332', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nifext_5000_333', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090702_448', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_359', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1860313010_360', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_639_2', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002001_6', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao2007137787_7', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_639_2', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_4', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao120573470_5', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090201_426', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002001_438', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_subcell_20090206_439', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090201_426', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002001_427', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nifext_103_428', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090702_65', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_489', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao120573470_490', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090702_65', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002001_67', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1417703748_68', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090702_485', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002001_428', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1417703748_429', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090802_1', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002000_2', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao5651809446_3', -)).
@@ -3078,10 +3023,8 @@
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090205_96', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002002_97', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao120573470_98', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#ndpo_340_15', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002001_199', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nifext_145_200', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_147_366', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002001_367', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1417703748_368', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_147_366', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_370', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao120573470_371', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_147_352', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002000_353', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1417703748_354', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_147_382', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002001_383', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1417703748_384', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_147_94', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_96', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao120573470_97', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_147_487', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002001_342', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1417703748_343', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090708_80', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002001_81', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1417703748_82', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_147_425', (-, 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002001_426', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1417703748_427', -)).
@@ -3092,15 +3035,10 @@
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090204_214', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao-867568886_296', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002002_297', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao5651809446_298', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090204_214', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_796_24', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002002_26', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao-867568886_27', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090204_214', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_1562_335', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002002_337', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao120573470_338', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090204_214', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_1672_10', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_236', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao-867568886_237', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090204_214', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1279474730_373', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0000937_29', -, -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090204_214', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_1709_219', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002002_21', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao-867568886_22', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090204_214', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_1709_219', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_394', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao-867568886_395', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090204_214', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_1709_219', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_387', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao120573470_388', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090204_214', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_1709_219', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002002_282', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao5651809446_283', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090204_214', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_1709_219', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_220', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao120573470_222', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090204_214', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_721_260', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002000_261', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao120573470_262', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090204_214', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_796_390', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_391', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao120573470_392', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090204_214', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_1489_285', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002002_286', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao5651809446_287', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090204_214', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao250772229_375', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002002_377', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao5651809446_378', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090204_214', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_subcell_20090208_360', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0000586_361', -, -)).
@@ -3109,61 +3047,28 @@
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090204_214', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao250772229_56', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001771_58', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao120573470_222', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090204_214', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao250772229_56', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001477_57', -, -)).
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-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090204_214', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_anat_20090209_1', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_1', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1770195789_2', -)).
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pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090202_440', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao138219748_484', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002002_485', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao471310941_486', -)).
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pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090203_562', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_1508_639', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002002_640', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao333741607_641', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090203_562', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_1709_579', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002002_642', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao333741607_643', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090203_562', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_1709_579', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_622', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao2409833926_623', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090203_562', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_721_563', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002002_635', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao333741607_636', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090203_562', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_721_563', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_618', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao2409833926_619', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090203_562', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_2547_612', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_613', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao2409833926_614', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090203_562', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_1204_624', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_625', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_subcell_20090202_626', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090203_562', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_1241_567', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002002_637', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao333741607_638', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#ndpo_331_419', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_1494_420', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002001_421', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nifext_103_67', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#ndpo_331_419', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_2667_429', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002002_431', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_mol_20090508_432', -)).
@@ -3171,12 +3076,7 @@
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090706_456', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1687101204_422', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002037_423', -, -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_090706_456', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao519252327_410', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002001_415', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao5051906853_413', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090205_109', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_796_116', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001562_117', -, -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090205_109', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_1153_82', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_15', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_mol_20090302_16', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090205_109', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nifext_36_27', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_33', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_mol_20090302_35', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090205_109', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nifext_31_23', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_24', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_mol_20090302_25', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090205_109', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nifext_17_37', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_40', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_mol_20090302_41', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090205_109', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1233810115_110', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001790_113', -, -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090205_109', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1233810115_18', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_20', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_mol_20090302_21', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090205_109', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_1672_14', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0000587_119', -, -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_125_51', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_990_52', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002001_53', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nifext_145_54', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_125_51', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_990_52', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002002_55', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1394521419_56', -)).
@@ -3184,98 +3084,46 @@
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_125_51', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_1489_63', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002001_66', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao471801888_67', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#ndpo_340_12', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_905_150', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002002_152', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao4933778419_153', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#ndpo_340_12', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nifext_145_154', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002002_155', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao4933778419_156', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090205_53', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_1489_52', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_39', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_mol_20090302_40', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090205_53', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1074198261_47', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002000_48', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_mol_20090302_49', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090205_53', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1417703748_47', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_49', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_mol_20090302_50', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090205_53', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao205380252_61', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_62', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_mol_20090302_63', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090205_53', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1770195789_65', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0000639_70', -, -)).
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-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090205_53', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_1555_72', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_79', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1211023249_80', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090205_53', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_1555_72', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_73', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1770195789_74', -)).
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-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090205_53', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao2007137787_71', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_72', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1860313010_73', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090205_53', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1860313010_64', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0000639_65', -, -)).
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-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090205_53', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_1610_59', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_60', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1770195789_61', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090205_53', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_1494_75', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002000_76', -, -)).
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pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_266_216', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao5651809446_222', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao3710738764_223', -, -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#ndpo_330_355', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_796_356', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao9615155060_357', -, -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#ndpo_330_387', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_796_347', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001162_348', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nifext_8057_349', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#ndpo_330_387', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_796_356', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao9615155060_357', -, -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#ndpo_330_387', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_2547_417', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_418', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1417703748_419', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#ndpo_330_387', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_721_421', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_422', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1417703748_423', -)).
-pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#ndpo_330_387', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_1560_425', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0001555_426', -, -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090203_587', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_1204_608', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0002001_609', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#sao1417703748_610', -)).
pkb_db:organism_phenotype('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#nlx_organ_20090203_587', ('http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#birnlex_1494_593', 'http://ccdb.ucsd.edu/PKB/1.0/PKB.owl#PATO_0000587_607', -, -)).
pkb_db:organism_phenotype('ht...
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