#210 NTR: prestalk U cell

[Petra Fey]

Please add two new cell types from PMID:20080085. These have also been added to the latest release of the Dicty anatomy ontology.

Thanks,
Petra, dictyBase

1)
NEW: prestalk U cell
def: "Cell that is undergoing differentiation to become a stalk cell. pstU cells express the rtaA marker and preferentially populate the upper cup region during culmination." [DDB:pf, PMID:20080085]
synonym: "pstU cell" EXACT []
is_a: id: CL:0000269 prestalk cell

2)
NEW: prestalk U/anterior like cell
def: "Anterior-like cell that expresses the rtaA promoter but not ecmA, ecmB or the ecmO promoter." [DDB:pf, PMID:20080085]
synonym: "pstU/ALC" EXACT []
is_a: id: CL:0000265 anterior like cell

[Chris Mungall]

I suggest DDAnat takes ownership for all dicty cell types, no sense repeating here, not many useful generalizations (interesting ongoing discussion on epithelial cells notwithstanding!)

[Chris Mungall]

Should go into DictyAnat

On 2 Dec 2014, at 13:04, Nicole Vasilevsky wrote:

• assigned_to: Chris Mungall
• Group: --> GO-Cell-XP

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[cell-ontology-cl-requests:#210] NTR: prestalk U cell

Status: open
Group: GO-Cell-XP
Labels: new term request
Created: Fri Jan 18, 2013 08:10 PM UTC by Petra Fey
Last Updated: Fri Jan 18, 2013 08:10 PM UTC
Owner: Chris Mungall

Please add two new cell types from PMID:20080085. These have also been
added to the latest release of the Dicty anatomy ontology.

Thanks,
Petra, dictyBase

1)
NEW: prestalk U cell
def: "Cell that is undergoing differentiation to become a stalk cell.
pstU cells express the rtaA marker and preferentially populate the
upper cup region during culmination." [DDB:pf, PMID:20080085]
synonym: "pstU cell" EXACT []
is_a: id: CL:0000269 prestalk cell

2)
NEW: prestalk U/anterior like cell
def: "Anterior-like cell that expresses the rtaA promoter but not
ecmA, ecmB or the ecmO promoter." [DDB:pf, PMID:20080085]
synonym: "pstU/ALC" EXACT []
is_a: id: CL:0000265 anterior like cell

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[Nicole Vasilevsky]

These have been to added to DDAnt. We will consider importing into CL at a later date.