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From: <bjo...@us...> - 2009-08-17 17:06:38
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Revision: 2014
http://obi.svn.sourceforge.net/obi/?rev=2014&view=rev
Author: bjoernpeters
Date: 2009-08-17 17:06:26 +0000 (Mon, 17 Aug 2009)
Log Message:
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removal of 'has specified participant' relation, and change of 'has specified input' definition to allow for inputs that don't participate at the start of the process.
Modified Paths:
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trunk/src/ontology/branches/obi.owl
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From: <bjo...@us...> - 2009-08-19 16:49:17
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Revision: 2018
http://obi.svn.sourceforge.net/obi/?rev=2018&view=rev
Author: bjoernpeters
Date: 2009-08-19 16:49:10 +0000 (Wed, 19 Aug 2009)
Log Message:
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work on sequencing assays. split between those that determine the primary sequence of DNA / protein etc. vs. those like determine interaction sites, methylation sites. This is not completed but work in progress, and needs to be further aligned with Philippe's other classes.
Modified Paths:
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trunk/src/ontology/branches/obi.owl
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From: <jzh...@us...> - 2009-08-24 15:57:14
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Revision: 2025
http://obi.svn.sourceforge.net/obi/?rev=2025&view=rev
Author: jzheng24
Date: 2009-08-24 15:57:07 +0000 (Mon, 24 Aug 2009)
Log Message:
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add label (and definition) for 4 imported terms
Modified Paths:
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trunk/src/ontology/branches/obi.owl
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From: <jzh...@us...> - 2009-08-24 17:36:51
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Revision: 2027
http://obi.svn.sourceforge.net/obi/?rev=2027&view=rev
Author: jzheng24
Date: 2009-08-24 17:36:43 +0000 (Mon, 24 Aug 2009)
Log Message:
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revert to version 2018
Modified Paths:
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trunk/src/ontology/branches/obi.owl
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From: <bjo...@us...> - 2009-08-26 16:21:28
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Revision: 2032
http://obi.svn.sourceforge.net/obi/?rev=2032&view=rev
Author: bjoernpeters
Date: 2009-08-26 16:21:21 +0000 (Wed, 26 Aug 2009)
Log Message:
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modified 'taking sample from organism' to 'collecting specimen from organism', to take into account outcome of specimen<->sample discussion.
Modified Paths:
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trunk/src/ontology/branches/obi.owl
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From: <bjo...@us...> - 2009-08-26 18:15:00
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Revision: 2033
http://obi.svn.sourceforge.net/obi/?rev=2033&view=rev
Author: bjoernpeters
Date: 2009-08-26 18:14:53 +0000 (Wed, 26 Aug 2009)
Log Message:
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Added instances of manufacturer roles to organization instances. Created defined manufacturer class. This addresses the manuscript concerns for now.
Modified Paths:
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trunk/src/ontology/branches/obi.owl
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From: <bjo...@us...> - 2009-08-27 02:31:16
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Revision: 2037
http://obi.svn.sourceforge.net/obi/?rev=2037&view=rev
Author: bjoernpeters
Date: 2009-08-27 02:31:08 +0000 (Thu, 27 Aug 2009)
Log Message:
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added glucometer
Modified Paths:
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trunk/src/ontology/branches/obi.owl
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From: <bjo...@us...> - 2009-08-27 02:52:17
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Revision: 2038
http://obi.svn.sourceforge.net/obi/?rev=2038&view=rev
Author: bjoernpeters
Date: 2009-08-27 02:52:09 +0000 (Thu, 27 Aug 2009)
Log Message:
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obsoleted duplicate mass spectrometry term
Modified Paths:
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trunk/src/ontology/branches/obi.owl
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From: <par...@us...> - 2009-08-27 09:21:51
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Revision: 2042
http://obi.svn.sourceforge.net/obi/?rev=2042&view=rev
Author: parkinso
Date: 2009-08-27 09:21:36 +0000 (Thu, 27 Aug 2009)
Log Message:
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added produce data function to glucometer, classified as instrument
Modified Paths:
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trunk/src/ontology/branches/obi.owl
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From: <al...@us...> - 2009-08-28 04:41:47
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Revision: 2047
http://obi.svn.sourceforge.net/obi/?rev=2047&view=rev
Author: alanr
Date: 2009-08-28 04:41:36 +0000 (Fri, 28 Aug 2009)
Log Message:
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merge ontie
Modified Paths:
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trunk/src/ontology/branches/obi.owl
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From: <al...@us...> - 2009-08-29 22:12:59
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Revision: 2051
http://obi.svn.sourceforge.net/obi/?rev=2051&view=rev
Author: alanr
Date: 2009-08-29 22:12:52 +0000 (Sat, 29 Aug 2009)
Log Message:
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fixed obsoleting of subclasses of obsolete_to_be_fixed
Modified Paths:
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trunk/src/ontology/branches/obi.owl
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From: <jam...@us...> - 2009-09-01 12:25:49
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Revision: 2055
http://obi.svn.sourceforge.net/obi/?rev=2055&view=rev
Author: jamesmalone
Date: 2009-09-01 12:21:46 +0000 (Tue, 01 Sep 2009)
Log Message:
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some obsolete roles moved
Modified Paths:
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trunk/src/ontology/branches/obi.owl
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From: <bjo...@us...> - 2009-09-07 20:16:27
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Revision: 2058
http://obi.svn.sourceforge.net/obi/?rev=2058&view=rev
Author: bjoernpeters
Date: 2009-09-07 20:16:12 +0000 (Mon, 07 Sep 2009)
Log Message:
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removed 'has output' relation (introduced in ONTIE merge), and updated textual definitions 'is specified input / output' to be in sync with inverses.
Modified Paths:
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trunk/src/ontology/branches/obi.owl
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From: <bjo...@us...> - 2009-09-07 22:25:49
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Revision: 2059
http://obi.svn.sourceforge.net/obi/?rev=2059&view=rev
Author: bjoernpeters
Date: 2009-09-07 22:25:37 +0000 (Mon, 07 Sep 2009)
Log Message:
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removed ONTIE relations that are not necessary and (has process location, has output), renamed 'results from' to 'process is result of' to disambiguate with OBI relation of the same name.
Modified Paths:
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trunk/src/ontology/branches/obi.owl
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From: <bjo...@us...> - 2009-09-07 22:48:17
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Revision: 2060
http://obi.svn.sourceforge.net/obi/?rev=2060&view=rev
Author: bjoernpeters
Date: 2009-09-07 22:48:10 +0000 (Mon, 07 Sep 2009)
Log Message:
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merged 'disease' and 'disease iedb' into one term.
Modified Paths:
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trunk/src/ontology/branches/obi.owl
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From: <bjo...@us...> - 2009-09-08 00:26:53
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Revision: 2062
http://obi.svn.sourceforge.net/obi/?rev=2062&view=rev
Author: bjoernpeters
Date: 2009-09-07 23:36:53 +0000 (Mon, 07 Sep 2009)
Log Message:
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moved all PCR related terms under 'enzymatic amplification'. will need further cleanup, as some children are redundant.
Modified Paths:
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trunk/src/ontology/branches/obi.owl
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From: <bjo...@us...> - 2009-09-08 14:50:46
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Revision: 2063
http://obi.svn.sourceforge.net/obi/?rev=2063&view=rev
Author: bjoernpeters
Date: 2009-09-08 14:50:38 +0000 (Tue, 08 Sep 2009)
Log Message:
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fixed 'occurence of disease' which was still using the duplicate 'disease' term I obsoleted previously
Modified Paths:
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trunk/src/ontology/branches/obi.owl
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From: <par...@us...> - 2009-09-09 22:13:19
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Revision: 2065
http://obi.svn.sourceforge.net/obi/?rev=2065&view=rev
Author: parkinso
Date: 2009-09-09 22:13:11 +0000 (Wed, 09 Sep 2009)
Log Message:
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Modified Paths:
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trunk/src/ontology/branches/obi.owl
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From: <par...@us...> - 2009-09-14 10:04:15
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Revision: 2068
http://obi.svn.sourceforge.net/obi/?rev=2068&view=rev
Author: parkinso
Date: 2009-09-14 10:04:05 +0000 (Mon, 14 Sep 2009)
Log Message:
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Obsoleted role of potential study participant based on email discussion. Existing child classes moved to _under discussion.
Modified Paths:
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trunk/src/ontology/branches/obi.owl
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From: <par...@us...> - 2009-09-14 19:14:14
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Revision: 2070
http://obi.svn.sourceforge.net/obi/?rev=2070&view=rev
Author: parkinso
Date: 2009-09-14 19:14:08 +0000 (Mon, 14 Sep 2009)
Log Message:
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1. edited drug role def. to make it more general
2. re-pointed obsolete class role of potential study participant to study subject
3. study participant role deprecated
4. excluded study participant role deprecated
5. study population role deprecated, child terms asserted under role
Modified Paths:
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trunk/src/ontology/branches/obi.owl
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From: <par...@us...> - 2009-09-15 13:24:24
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Revision: 2072
http://obi.svn.sourceforge.net/obi/?rev=2072&view=rev
Author: parkinso
Date: 2009-09-15 13:23:51 +0000 (Tue, 15 Sep 2009)
Log Message:
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edited drug definition to conform to FG's proposal
Modified Paths:
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trunk/src/ontology/branches/obi.owl
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From: <al...@us...> - 2009-09-15 21:17:36
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Revision: 2073
http://obi.svn.sourceforge.net/obi/?rev=2073&view=rev
Author: alanr
Date: 2009-09-15 21:17:29 +0000 (Tue, 15 Sep 2009)
Log Message:
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OBI_0000283 -> IAO_0000412
Modified Paths:
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trunk/src/ontology/branches/obi.owl
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From: <mco...@us...> - 2009-09-17 21:43:52
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Revision: 2077
http://obi.svn.sourceforge.net/obi/?rev=2077&view=rev
Author: mcourtot
Date: 2009-09-17 21:43:41 +0000 (Thu, 17 Sep 2009)
Log Message:
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added xmlns, corrected xml:base and added ontology URI
Modified Paths:
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trunk/src/ontology/branches/obi.owl
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From: <par...@us...> - 2009-09-23 20:02:19
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Revision: 2080
http://obi.svn.sourceforge.net/obi/?rev=2080&view=rev
Author: parkinso
Date: 2009-09-23 20:02:12 +0000 (Wed, 23 Sep 2009)
Log Message:
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guar gum, fucoidan, antithrombin III added
Modified Paths:
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trunk/src/ontology/branches/obi.owl
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From: <par...@us...> - 2009-09-24 15:54:57
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Revision: 2082
http://obi.svn.sourceforge.net/obi/?rev=2082&view=rev
Author: parkinso
Date: 2009-09-24 15:54:43 +0000 (Thu, 24 Sep 2009)
Log Message:
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Modified Paths:
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trunk/src/ontology/branches/obi.owl
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