When running as a portable application, NppToR still stores settings in %APPDATA% instead of its own folder. Also, some odd behavior with the path to Notepad++: the relative path launches Notepad++, but not after restarting NppToR; the full path never works. Version 2.5.3 did not fix the problem.
See this forum thread for a little more information: https://sourceforge.net/projects/npptor/forums/forum/880832/topic/4099968
I would have bumped the thread, but I noticed your request that people use the tracker.
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