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From: Edward d'A. <ed...@do...> - 2012-04-24 10:05:43
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Thank you for the information. If no one else encounters a problem with this new DMG file, then I'll soon make a new relax release with proper Mac OS X support. I have also now performed a bit of black magic to allow the GUI tests of the test suite to work within the GUI and not fatally damage the GUI at the same time. Cheers, Edward On 24 April 2012 09:43, Martin Ballaschk <bal...@do...> wrote: > Dear Edward and everybody else, > > sorry for responding so late. Opening the app works flawlessly for me on Lion, there are no apparent errors when clicking around but I didn't have time to test anything else. > > I will test the command-line portion with the test suite data, but I can't say when I will have time. > > Cheers > Martin > > > On 20.04.2012, at 16:09, Edward d'Auvergne wrote: > >> Dear all, >> >> If you are a Mac OS X user, I would like to ask if you could help with >> relax's support for Mac OS X? I have created a special relax >> application which targets 10.5, 10.6, and 10.7 systems and which is a >> 3-way universal binary build for ppc, i386, and x86_64 systems. It is >> using a full Python 2.7 framework and the wxWidgets used to create the >> graphical user interface is using Cocoa. Unfortunately I do not have >> access to enough test systems covering all these OS versions and CPU >> architectures to be able to comprehensively test the Mac support. I >> have now successfully tested on real hardware (Intel x86_64) with both >> Lion and Snow Leopard, but more testing would be useful, especially if >> you have an old PPC system lying around. >> >> I have created a special relax version 1.3.15_rc1 release just for Mac >> users. This can be found on the download page at >> http://download.gna.org/relax/. This is a DMG file containing the >> relax app. If you could download this 130 Mb file and see if relax >> will simply open, taht would be very useful information. I have more >> instructions below for performing full analyses using the data in the >> relax test-suite, if are interested in helping to improve Mac OS X >> support for relax. Any help would be appreciated! >> >> Cheers, >> >> Edward >> >> >> >> >> P. S. Here are some instructions for extensively stress-testing >> relax, which is also useful for learning how to use relax The data >> from the test-suite is all truncated, and sometime randomised, but can >> be used for a full analysis. >> >> >> 1) Testing relax via analyses. If some value is not give below, then >> it can be invented without consequence. All the data is in the >> relax.app/Contents/Resources/test_suite folder. >> >> 1a) NOE analysis. >> >> There are two Sparky peak lists in >> ./test_suite/shared_data/peak_lists/ called 'ref_ave.list' and >> 'sat_ave.list'. To load the spin systems for these lists into relax, >> the PDB file test_suite/shared_data/structures/Ap4Aase_res1-12.pdb can >> be used. This is sufficient for a full analysis. >> >> >> 1b) R2 analysis. >> >> A full set of Sparky peak lists for R2 data can be found in >> ./test_suite/shared_data/curve_fitting/. The relevant sequence data >> can be extracted from the test_suite/shared_data/Ap4Aase.seq file. >> You can invent the delay times of these data sets for fun. >> >> >> 1c) Model-free analysis. >> >> One of the many examples from the model-free shared data directories >> is for a synthetic spherical diffusion model. The data can be found >> at ./test_suite/shared_data/model_free/sphere. The PDB file and >> relaxation files are all there, no other files are required. >> >> >> 2) Stress testing. >> >> For this type of testing, randomly clicking everywhere and anywhere in >> any order would be useful. Or throwing in any random data or files. >> If relax responds with an error that is not a special 'RelaxError', >> then this is a bug. The nastier you can break relax, the better! >> >> >> 3) relax information >> >> Before reporting any problems, a copy of the relax information print >> out would be incredibly useful (assuming you can open relax to start >> with). You will find this under the Tools->System Information menu. >> The output will go to the relax controller, and this text can be >> copied and pasted. >> >> >> 4) Reporting problems. >> >> If you notice any problems, could you please report this as a bug >> report (https://gna.org/bugs/?func=additem&group=relax). Please try >> to report all steps required to reproduce the problem, Include the >> information print out, and copy and paste all error messages >> (including most of the information before the error occurred). Note >> that any strange behaviour outside of what you would expect is to be >> considered a bug. Any suggestions would also be appreciated (though >> if it involves months worth of work, it may not happen straight away >> ;). Thank you very much! >> >> _______________________________________________ >> relax (http://www.nmr-relax.com) >> >> This is the relax-users mailing list >> rel...@do... >> >> To unsubscribe from this list, get a password >> reminder, or change your subscription options, >> visit the list information page at >> https://mail.gna.org/listinfo/relax-users > > -- > Martin Ballaschk > AG Schmieder > Leibniz-Institut für Molekulare Pharmakologie > Robert-Rössle-Str. 10 > 13125 Berlin > bal...@do... > Tel.: +49-30-94793-234/315 > Büro: A 1.26 > Labor: C 1.10 > |
