the nifti java library has several issues with unsigned data types. the way with the Math.abs() function used in readVol is not working correctly. instead one has to use masking.
for export there are also several issues as some data formats are not supported properly. the writeVol function exports the data but sometimes uses a different format than specefied in the header.
i attached a patched version of nifti java lib where i fixed all of these issues.
could you please release a corrected version of the lib soon? :)
thx in advance
Martin
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Patched version