MutAid Wiki

MutAid: Sanger and NGS based pipeline for mutation screening.

Status: Abandoned

Brought to you by: ramvinay1

Step1.1: Download and install the Virtual Box from http://www.oracle.com/technetwork/server-storage/virtualbox/downloads/index.html#vbox

Step1.2: After installation of Virtual Box download and install the Virtual Box Extension Pack from http://www.oracle.com/technetwork/server-storage/virtualbox/downloads/index.html#extpack

Step2: Download MutAid Virtual machine from https://sourceforge.net/p/mutaid/wiki/Virtual_Machine

Step3: Import MutAid Virtual Machine file into Virtual Box.

Step4: Login into MutAid Virtual machine with username and password = testuser

Step5: Open terminal and change to MutAid_v1.1 directory with following command on terminal:

cd ~/MutAid_v1.1

Step6: Run MutAid pipeline with following command on terminal:

sh ./run_mutaid.sh

Step7: To run MutAid pipeline with other data set, prepare the Target file and MutAidOption file and run the MutAid pipeline.