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From: Vladimir Y. <ya...@gm...> - 2013-02-15 21:38:12
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Hello, For unclear reason installation of MUMmer 3.23 on 64bit RHEL58 aborted with error. Here is partial output, everything before that seems completed OK: make[1]: Leaving directory `/home/yaximik/Bioinformatics/MUMmer3.23/src/kurtz' cd /home/yaximik/Bioinformatics/MUMmer3.23/src/tigr; make all make[1]: Entering directory `/home/yaximik/Bioinformatics/MUMmer3.23/src/tigr' /usr/bin/g++ -O3 tigrinc.cc -c -o tigrinc.o /usr/bin/g++ -O3 annotate.cc tigrinc.o -o /home/yaximik/Bioinformatics/MUMmer3.23/annotate; chmod 755 /home/yaximik/Bioinformatics/MUMmer3.23/annotate /usr/bin/g++ -O3 combineMUMs.cc tigrinc.o -o /home/yaximik/Bioinformatics/MUMmer3.23/combineMUMs; chmod 755 /home/yaximik/Bioinformatics/MUMmer3.23/combineMUMs /usr/bin/g++ -O3 delta.cc -c -o delta.o /usr/bin/g++ -O3 delta-filter.cc tigrinc.o delta.o -o /home/yaximik/Bioinformatics/MUMmer3.23/delta-filter; chmod 755 /home/yaximik/Bioinformatics/MUMmer3.23/delta-filter /usr/bin/g++ -O3 gaps.cc tigrinc.o -o /home/yaximik/Bioinformatics/MUMmer3.23/gaps; chmod 755 /home/yaximik/Bioinformatics/MUMmer3.23/gaps /usr/bin/g++ -O3 mgaps.cc tigrinc.o -o /home/yaximik/Bioinformatics/MUMmer3.23/mgaps; chmod 755 /home/yaximik/Bioinformatics/MUMmer3.23/mgaps /usr/bin/g++ -O3 sw_align.cc -c -o sw_align.o /usr/bin/g++ -O3 postnuc.cc tigrinc.o sw_align.o -o /home/yaximik/Bioinformatics/MUMmer3.23/aux_bin/postnuc; chmod 755 /home/yaximik/Bioinformatics/MUMmer3.23/aux_bin/postnuc /usr/bin/ld: cannot open output file /home/yaximik/Bioinformatics/MUMmer3.23/aux_bin/postnuc: No such file or directory collect2: ld returned 1 exit status chmod: cannot access `/home/yaximik/Bioinformatics/MUMmer3.23/aux_bin/postnuc': No such file or directory make[1]: *** [postnuc] Error 1 make[1]: Leaving directory `/home/yaximik/Bioinformatics/MUMmer3.23/src/tigr' make: *** [tigr] Error 2 [yaximik@G5NNJN1 MUMmer3.23]$ What could be the problem? Vladimir |