Download
The software builds 3D models of chromosomes or genome given chromosomal contacts data such as Hi-C, TCC, 5C. MOGEN was tested on simulated datasets. Using real Hi-C data of a human cell line, MOGEN built models that are consistent with knowledge about the genome of the cell line.
Detail on how to use it: https://github.com/BDM-Lab/MOGEN
It is published in Bioinformatics: http://bioinformatics.oxfordjournals.org/content/32/9/1286
Bioinformatics, Data Mining, Machine Learning (BDM) Laboratory,
Jianlin Cheng, PhD
Department of Computer Science
University of Missouri, Columbia
Email: chengji@missouri.edu
Features
- 3D genome, chromosome modeling
Project Samples
Follow MOGEN
Other Useful Business Software
Cut Data Warehouse Costs by 54%
BigQuery delivers 54% lower TCO with exabyte scale and flexible pricing. Free migration tools handle the SQL translation automatically.
Rate This Project
Login To Rate This Project
User Reviews
Be the first to post a review of MOGEN!
