mirpro_gff3_to_gtf bug

Tool for miRNA-seq analysis in C++

Brought to you by: liangc_mu, sjm888888

#4 mirpro_gff3_to_gtf bug

Milestone: 1.0

Status: closed

Owner: Jieming Shi

Labels: None

Updated: 2016-06-16

Created: 2015-10-21

Creator: liangc_mu

Private: No

When mirpro_gff3_to_gtf is used to transfer NCBI gff file (in gff3) format, we noticed the following problems. (1) For the feature of 'mRNA', 'transcript', 'ncRNA', 'rRNA', 'tRNA', the entry has missed 'transcript_id'.
(2) Also, any feature with the feature of RNAs that is other than 'mRNA' and 'transcript' has been ignored by the program.

Discussion

Jieming Shi - 2016-05-03

Fixed bug.

If you would like to refer to this comment somewhere else in this project, copy and paste the following link:

Jieming Shi - 2016-06-16

status: open --> closed
If you would like to refer to this comment somewhere else in this project, copy and paste the following link:

Gen AI apps are built with MongoDB Atlas

Atlas offers built-in vector search and global availability across 125+ regions. Start building AI apps faster, all in one place.

Try Free →

mirpro_gff3_to_gtf bug

Tool for miRNA-seq analysis in C++

Milestone

Searches

Help

#4 mirpro_gff3_to_gtf bug

Discussion