matplotlib-users

[Matplotlib-users] unable to compile matplotlib 0.73.1 (Linux 2.6.8 x86_64)

[Laurent T. <lau...@la...>]

Hello all,


I am trying to install matplotlib for Python 2.3 under Linux (Mandrake 10.1 
AMD64) and the installation fails while trying to perform the build command.
I checked for the prerequisite and all the recommended packages seem to be 
correctly installed.

I am unable to understand the compilation error as it does not look like a 
trivial error (include file missing, library not reachable, ....) and as my 
C++ and Python skills are yet very weak.

The error is reproduced hereafter:

[root@TigerBox matplotlib-0.73.1]# python setup.py build
running build
running build_py
running build_ext
building 'matplotlib.backends._gtkagg' extension
creating build/temp.linux-x86_64-2.3
creating build/temp.linux-x86_64-2.3/src
creating build/temp.linux-x86_64-2.3/CXX
gcc -pthread -fno-strict-aliasing -DNDEBUG -O2 -pipe -Wall -g -fPIC 
-I/usr/local/include -I/usr/include -Isrc -Iagg22/include -I. 
-I/usr/local/include -I/usr/include -I/usr/local/include/freetype2 
-I/usr/include/freetype2 -Isrc/freetype2 -Iagg22/include/freetype2 
-I./freetype2 -I/usr/local/include/freetype2 -I/usr/include/freetype2 
-I/usr/local/include -I/usr/include -I/usr/include/pygtk-2.0 
-I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/gtk-2.0 
-I/usr/lib64/gtk-2.0/include -I/usr/X11R6/include -I/usr/include/atk-1.0 
-I/usr/include/pango-1.0 -I/usr/include/freetype2 
-I/usr/include/freetype2/freetype2 -I/usr/include/freetype2/freetype2/config 
-I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include 
-I/usr/include/python2.3 -c CXX/IndirectPythonInterface.cxx -o 
build/temp.linux-x86_64-2.3/CXX/IndirectPythonInterface.o
gcc -pthread -fno-strict-aliasing -DNDEBUG -O2 -pipe -Wall -g -fPIC 
-I/usr/local/include -I/usr/include -Isrc -Iagg22/include -I. 
-I/usr/local/include -I/usr/include -I/usr/local/include/freetype2 
-I/usr/include/freetype2 -Isrc/freetype2 -Iagg22/include/freetype2 
-I./freetype2 -I/usr/local/include/freetype2 -I/usr/include/freetype2 
-I/usr/local/include -I/usr/include -I/usr/include/pygtk-2.0 
-I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/gtk-2.0 
-I/usr/lib64/gtk-2.0/include -I/usr/X11R6/include -I/usr/include/atk-1.0 
-I/usr/include/pango-1.0 -I/usr/include/freetype2 
-I/usr/include/freetype2/freetype2 -I/usr/include/freetype2/freetype2/config 
-I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include 
-I/usr/include/python2.3 -c CXX/cxxextensions.c -o 
build/temp.linux-x86_64-2.3/CXX/cxxextensions.o
gcc -pthread -fno-strict-aliasing -DNDEBUG -O2 -pipe -Wall -g -fPIC 
-I/usr/local/include -I/usr/include -Isrc -Iagg22/include -I. 
-I/usr/local/include -I/usr/include -I/usr/local/include/freetype2 
-I/usr/include/freetype2 -Isrc/freetype2 -Iagg22/include/freetype2 
-I./freetype2 -I/usr/local/include/freetype2 -I/usr/include/freetype2 
-I/usr/local/include -I/usr/include -I/usr/include/pygtk-2.0 
-I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/gtk-2.0 
-I/usr/lib64/gtk-2.0/include -I/usr/X11R6/include -I/usr/include/atk-1.0 
-I/usr/include/pango-1.0 -I/usr/include/freetype2 
-I/usr/include/freetype2/freetype2 -I/usr/include/freetype2/freetype2/config 
-I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include 
-I/usr/include/python2.3 -c CXX/cxx_extensions.cxx -o 
build/temp.linux-x86_64-2.3/CXX/cxx_extensions.o
./CXX/Extensions.hxx: In constructor 
`Py::PythonExtension<T>::PythonExtension() [with T = 
Py::ExtensionModuleBasePtr]':
CXX/cxx_extensions.cxx:92:   instantiated from here
./CXX/Extensions.hxx:472: warning: right-hand operand of comma has no effect
gcc -pthread -fno-strict-aliasing -DNDEBUG -O2 -pipe -Wall -g -fPIC 
-I/usr/local/include -I/usr/include -Isrc -Iagg22/include -I. 
-I/usr/local/include -I/usr/include -I/usr/local/include/freetype2 
-I/usr/include/freetype2 -Isrc/freetype2 -Iagg22/include/freetype2 
-I./freetype2 -I/usr/local/include/freetype2 -I/usr/include/freetype2 
-I/usr/local/include -I/usr/include -I/usr/include/pygtk-2.0 
-I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/gtk-2.0 
-I/usr/lib64/gtk-2.0/include -I/usr/X11R6/include -I/usr/include/atk-1.0 
-I/usr/include/pango-1.0 -I/usr/include/freetype2 
-I/usr/include/freetype2/freetype2 -I/usr/include/freetype2/freetype2/config 
-I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include 
-I/usr/include/python2.3 -c src/mplutils.cpp -o 
build/temp.linux-x86_64-2.3/src/mplutils.o
gcc -pthread -fno-strict-aliasing -DNDEBUG -O2 -pipe -Wall -g -fPIC 
-I/usr/local/include -I/usr/include -Isrc -Iagg22/include -I. 
-I/usr/local/include -I/usr/include -I/usr/local/include/freetype2 
-I/usr/include/freetype2 -Isrc/freetype2 -Iagg22/include/freetype2 
-I./freetype2 -I/usr/local/include/freetype2 -I/usr/include/freetype2 
-I/usr/local/include -I/usr/include -I/usr/include/pygtk-2.0 
-I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/gtk-2.0 
-I/usr/lib64/gtk-2.0/include -I/usr/X11R6/include -I/usr/include/atk-1.0 
-I/usr/include/pango-1.0 -I/usr/include/freetype2 
-I/usr/include/freetype2/freetype2 -I/usr/include/freetype2/freetype2/config 
-I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include 
-I/usr/include/python2.3 -c CXX/cxxsupport.cxx -o 
build/temp.linux-x86_64-2.3/CXX/cxxsupport.o
gcc -pthread -fno-strict-aliasing -DNDEBUG -O2 -pipe -Wall -g -fPIC 
-I/usr/local/include -I/usr/include -Isrc -Iagg22/include -I. 
-I/usr/local/include -I/usr/include -I/usr/local/include/freetype2 
-I/usr/include/freetype2 -Isrc/freetype2 -Iagg22/include/freetype2 
-I./freetype2 -I/usr/local/include/freetype2 -I/usr/include/freetype2 
-I/usr/local/include -I/usr/include -I/usr/include/pygtk-2.0 
-I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include -I/usr/include/gtk-2.0 
-I/usr/lib64/gtk-2.0/include -I/usr/X11R6/include -I/usr/include/atk-1.0 
-I/usr/include/pango-1.0 -I/usr/include/freetype2 
-I/usr/include/freetype2/freetype2 -I/usr/include/freetype2/freetype2/config 
-I/usr/include/glib-2.0 -I/usr/lib64/glib-2.0/include 
-I/usr/include/python2.3 -c src/_gtkagg.cpp -o 
build/temp.linux-x86_64-2.3/src/_gtkagg.o
In file included from /usr/include/python2.3/Python.h:8,
                 from /usr/include/pygtk-2.0/pygobject.h:5,
                 from src/_gtkagg.cpp:8:
/usr/include/python2.3/pyconfig.h:850:1: warning: "_POSIX_C_SOURCE" redefined
In file included from /usr/include/string.h:26,
                 from /usr/lib64/gcc/x86_64-mandrake-linux-gnu/3.4.1/../../../../include/c++/3.4.1/cstring:51,
                 from src/_gtkagg.cpp:1:
/usr/include/features.h:132:1: warning: this is the location of the previous 
definition
In file included from src/_gtkagg.cpp:8:
/usr/include/pygtk-2.0/pygobject.h:124: error: expected `,' or `...' before 
"typename"
/usr/include/pygtk-2.0/pygobject.h:131: error: expected `,' or `...' before 
"typename"
In file included from agg22/include/agg_vertex_sequence.h:23,
                 from agg22/include/agg_vcgen_contour.h:20,
                 from agg22/include/agg_conv_contour.h:23,
                 from src/_backend_agg.h:13,
                 from src/_gtkagg.cpp:11:
agg22/include/agg_array.h: In member function `agg::int8u* 
agg::pod_allocator::allocate(unsigned int, unsigned int)':
agg22/include/agg_array.h:581: warning: cast from pointer to integer of 
different size
error: command 'gcc' failed with exit status 1



I wonder if it can be due to x86_64 architecture or a wrong devel version in 
the required libs.
It would be a great help if someone could give me a few advices or an idea 
about how to yank out this nasty mess.

I thank you in advance for your contribution and feel sorry for my bad 
english,


Laurent


PS: I successfuly built gtk, pygtk, numarray, OpenGL for my python 2.3

Re: [Matplotlib-users] unable to compile matplotlib 0.73.1 (Linux 2.6.8 x86_64)

[John H. <jdh...@ac...>]

>>>>> "Laurent" == Laurent THIOUDELLET <lau...@la...> writes:

    Laurent> The error is reproduced hereafter:

    Laurent> In file included from src/_gtkagg.cpp:8:
    Laurent> /usr/include/pygtk-2.0/pygobject.h:124: error: expected
    Laurent> `,' or `...' before "typename"
    Laurent> /usr/include/pygtk-2.0/pygobject.h:131: error: expected
    Laurent> `,' or `...' before "typename" In file included from

This is a pygtk bug, discussed here:

  http://matplotlib.sourceforge.net/faq.html#PYGTK24

Search the matplotlib-users archive at
http://sourceforge.net/mailarchive/forum.php?forum_id=33405 for
"typename" for more specific information.

JDH