Thread: [matplotlib-devel] 1.3.0rc5 tagged

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matplotlib-devel

[matplotlib-devel] 1.3.0rc5 tagged

From: Michael D. <md...@st...> - 2013-07-19 16:26:30

At long last, I have a 1.3.0rc5 tagged.  I really hope to the software 
deities that this is the last rc before final.

If you wouldn't mind creating and posting the binaries, I'll make an 
announcment on matplotlib-users, give this a week and then put final out.

Cheers,
Mike

Re: [matplotlib-devel] 1.3.0rc5 tagged

From: Russell E. O. <ro...@uw...> - 2013-07-22 21:59:26

In article <51E...@st...>,
 Michael Droettboom <md...@st...> 
 wrote:

> At long last, I have a 1.3.0rc5 tagged.  I really hope to the software 
> deities that this is the last rc before final.
> 
> If you wouldn't mind creating and posting the binaries, I'll make an 
> announcment on matplotlib-users, give this a week and then put final out.

I have uploaded a binary for MacOS X 10.6 and later.


There were a few oddities this time around:
- matplotlib now requires pyparsing. I don't remember that being a 
requirement before -- even for previous 1.3 candidates.

- I had a lot of trouble with matplotlib complaining that dateutil was 
not present, even though it was in my site-packages. So I tried to 
reinstall it using pip install -U dateutil. Unfortunately pip has never 
heard of "dateutil". After some searching I realized the package name is 
actually "python-dateutil" (and not dateutils, which is a different 
package, alas). Even then, I had to install/upgrade it twice -- for some 
reason matplotlib couldn't find it at first. Very puzzling. I have no 
idea what was going on, but also didn't want to spend a lot of time 
trying to debug it.

- I get a few unit tests failures, including a slew of 
DeprecationWarnings about Operator '<<' that I don't remember seeing 
before. I have appended the test log.

- I first tried building on 10.8 and running on 10.6 (since that's much 
simpler for me). Unfortunately it doesn't work; on 10.6 it acts as if 
the unit tests themselves aren't part of the package. I have no idea 
why. I appended a log snippet showing the basic message, but I haven't 
looked into it further. This sounds worth spending some time tracking 
down.

-- Russell


Log of unit tests, with a few \n inserted for readability.
This is for a package built on 10.6 and running on 10.8.

python -c "import matplotlib as m ; m.test(verbosity=1)"
.........................................................
/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pack
ages/matplotlib/mathtext.py:2182: DeprecationWarning: Operator '<<' is 
deprecated, use '<<=' instead
  float_literal << Regex(r"[-+]?([0-9]+\.?[0-9]*|\.[0-9]+)")
/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pack
ages/matplotlib/mathtext.py:2183: DeprecationWarning: Operator '<<' is 
deprecated, use '<<=' instead
  int_literal   << Regex("[-+]?[0-9]+")
/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pack
ages/matplotlib/mathtext.py:2185: DeprecationWarning: Operator '<<' is 
deprecated, use '<<=' instead
  lbrace        << Literal('{').suppress()
...(and 40-odd more examples of the same that I omitted)...
/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pack
ages/matplotlib/mathtext.py:2319: DeprecationWarning: Operator '<<' is 
deprecated, use '<<=' instead
  main          << (non_math + ZeroOrMore(math_string + non_math)) + 
StringEnd()
.........................................................................
.........................................................................
......................
/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pack
ages/matplotlib/font_manager.py:1236: UserWarning: findfont: Font family 
['sans-serif'] not found. Falling back to Helvetica
  (prop.get_family(), self.defaultFamily[fontext]))
/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pack
ages/matplotlib/font_manager.py:1246: UserWarning: findfont: Could not 
match 
:family=Helvetica:style=normal:variant=normal:weight=normal:stretch=norma
l:size=medium. Returning 
/Applications/TUI.app/Contents/Resources/mpl-data/fonts/afm/putri8a.afm
  UserWarning)
/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pack
ages/matplotlib/font_manager.py:1246: UserWarning: findfont: Could not 
match 
:family=Helvetica:style=normal:variant=normal:weight=normal:stretch=norma
l:size=24.0. Returning 
/Applications/TUI.app/Contents/Resources/mpl-data/fonts/afm/putri8a.afm
  UserWarning)
/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pack
ages/matplotlib/font_manager.py:1246: UserWarning: findfont: Could not 
match 
:family=Helvetica:style=normal:variant=normal:weight=normal:stretch=norma
l:size=large. Returning 
/Applications/TUI.app/Contents/Resources/mpl-data/fonts/afm/putri8a.afm
  UserWarning)
F...kpathsea: Invalid fontname `Bitstream Vera Serif', contains ' '
Ekpathsea: Invalid fontname `Bitstream Vera Serif', contains ' '
EK.....K.................................................................
.........................................................................
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/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pack
ages/numpy/ma/core.py:777: RuntimeWarning: invalid value encountered in 
absolute
  return umath.absolute(a) * self.tolerance >= umath.absolute(b)
/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pack
ages/numpy/ma/core.py:3791: UserWarning: Warning: converting a masked 
element to nan.
  warnings.warn("Warning: converting a masked element to nan.")
...............
/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pack
ages/matplotlib/font_manager.py:1236: UserWarning: findfont: Font family 
['sans-serif'] not found. Falling back to Bitstream Vera Sans
  (prop.get_family(), self.defaultFamily[fontext]))
/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pack
ages/matplotlib/font_manager.py:1246: UserWarning: findfont: Could not 
match :family=Bitstream Vera 
Sans:style=normal:variant=normal:weight=normal:stretch=normal:size=14.0. 
Returning 
/Applications/TUI.app/Contents/Resources/mpl-data/fonts/ttf/Vera.ttf
  UserWarning)
/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pack
ages/matplotlib/font_manager.py:1246: UserWarning: findfont: Could not 
match :family=Bitstream Vera 
Sans:style=normal:variant=normal:weight=bold:stretch=500:size=14.0. 
Returning 
/Applications/TUI.app/Contents/Resources/mpl-data/fonts/ttf/Vera.ttf
  UserWarning)
/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pack
ages/matplotlib/font_manager.py:1236: UserWarning: findfont: Font family 
['sans serif'] not found. Falling back to Bitstream Vera Sans
  (prop.get_family(), self.defaultFamily[fontext]))
/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pack
ages/matplotlib/font_manager.py:1246: UserWarning: findfont: Could not 
match :family=Bitstream Vera 
Sans:style=italic:variant=normal:weight=750:stretch=500:size=14.0. 
Returning 
/Applications/TUI.app/Contents/Resources/mpl-data/fonts/ttf/Vera.ttf
  UserWarning)
/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pack
ages/matplotlib/font_manager.py:1246: UserWarning: findfont: Could not 
match :family=Bitstream Vera 
Sans:style=normal:variant=normal:weight=200:stretch=500:size=14.0. 
Returning 
/Applications/TUI.app/Contents/Resources/mpl-data/fonts/ttf/Vera.ttf
  UserWarning)
/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pack
ages/matplotlib/font_manager.py:1246: UserWarning: findfont: Could not 
match :family=Bitstream Vera 
Sans:style=normal:variant=normal:weight=500:stretch=100:size=14.0. 
Returning 
/Applications/TUI.app/Contents/Resources/mpl-data/fonts/ttf/Vera.ttf
  UserWarning)
FF...........................
/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pack
ages/matplotlib/gridspec.py:298: UserWarning: This figure includes Axes 
that are not compatible with tight_layout, so its results might be 
incorrect.
  warnings.warn("This figure includes Axes that are not "
............................................
/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pack
ages/numpy/testing/utils.py:807: RuntimeWarning: invalid value 
encountered in absolute
  z = abs(x-y)
........
======================================================================
ERROR: matplotlib.tests.test_backend_pgf.test_pathclip
----------------------------------------------------------------------
Traceback (most recent call last):
  File 
"/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
kages/nose/case.py", line 197, in runTest
    self.test(*self.arg)
  File 
"/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
kages/matplotlib/tests/test_backend_pgf.py", line 45, in backend_switcher
    result = func(*args, **kwargs)
  File 
"/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
kages/matplotlib/tests/test_backend_pgf.py", line 146, in test_pathclip
    plt.savefig(os.path.join(result_dir, "pgf_pathclip.pdf"))
  File 
"/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
kages/matplotlib/pyplot.py", line 561, in savefig
    return fig.savefig(*args, **kwargs)
  File 
"/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
kages/matplotlib/figure.py", line 1421, in savefig
    self.canvas.print_figure(*args, **kwargs)
  File 
"/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
kages/matplotlib/backend_bases.py", line 2220, in print_figure
    **kwargs)
  File 
"/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
kages/matplotlib/backends/backend_pgf.py", line 865, in print_pdf
    self._print_pdf_to_fh(fh, *args, **kwargs)
  File 
"/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
kages/matplotlib/backends/backend_pgf.py", line 823, in _print_pdf_to_fh
    self.print_pgf(fname_pgf, *args, **kwargs)
  File 
"/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
kages/matplotlib/backends/backend_pgf.py", line 805, in print_pgf
    self._print_pgf_to_fh(fh, *args, **kwargs)
  File 
"/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
kages/matplotlib/backends/backend_pgf.py", line 785, in _print_pgf_to_fh
    RendererPgf(self.figure, fh),
  File 
"/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
kages/matplotlib/backends/backend_pgf.py", line 409, in __init__
    self.latexManager = LatexManagerFactory.get_latex_manager()
  File 
"/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
kages/matplotlib/backends/backend_pgf.py", line 223, in get_latex_manager
    new_inst = LatexManager()
  File 
"/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
kages/matplotlib/backends/backend_pgf.py", line 309, in __init__
    raise LatexError("LaTeX returned an error, probably missing font or 
error in preamble:\n%s" % stdout)
LatexError: LaTeX returned an error, probably missing font or error in 
preamble:
This is XeTeX, Version 3.1415926-2.4-0.9998 (TeX Live 2012)
 restricted \write18 enabled.
**entering extended mode
LaTeX2e <2011/06/27>
Babel <v3.8m> and hyphenation patterns for english, dumylang, 
nohyphenation, ge
rman-x-2012-05-30, ngerman-x-2012-05-30, afrikaans, ancientgreek, 
ibycus, arabi
c, armenian, basque, bulgarian, catalan, pinyin, coptic, croatian, 
czech, danis
h, dutch, ukenglish, usenglishmax, esperanto, estonian, ethiopic, farsi, 
finnis
h, french, friulan, galician, german, ngerman, swissgerman, monogreek, 
greek, h
ungarian, icelandic, assamese, bengali, gujarati, hindi, kannada, 
malayalam, ma
rathi, oriya, panjabi, tamil, telugu, indonesian, interlingua, irish, 
italian, 
kurmanji, latin, latvian, lithuanian, mongolian, mongolianlmc, bokmal, 
nynorsk,
 polish, portuguese, romanian, romansh, russian, sanskrit, serbian, 
serbianc, s
lovak, slovenian, spanish, swedish, turkish, turkmen, ukrainian, 
uppersorbian, 
welsh, loaded.

*(/usr/local/texlive/2012/texmf-dist/tex/latex/base/minimal.cls
Document Class: minimal 2001/05/25 Standard LaTeX minimal class
)
(Please type a command or say `\end')
*
*(/usr/local/texlive/2012/texmf-dist/tex/latex/fontspec/fontspec.sty
(/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/expl3.sty
(/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3names.sty
(/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3bootstrap.sty))
(/usr/local/texlive/2012/texmf-dist/tex/latex/etex-pkg/etex.sty)
(/usr/local/texlive/2012/texmf-dist/tex/latex/graphics/color.sty
(/usr/local/texlive/2012/texmf-dist/tex/latex/latexconfig/color.cfg)
(/usr/local/texlive/2012/texmf-dist/tex/xelatex/xetex-def/xetex.def))
(/usr/local/texlive/2012/texmf-dist/tex/latex/graphics/graphics.sty
(/usr/local/texlive/2012/texmf-dist/tex/latex/graphics/trig.sty)
(/usr/local/texlive/2012/texmf-dist/tex/latex/latexconfig/graphics.cfg))
(/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3basics.sty)
(/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3expan.sty)
(/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3tl.sty)
(/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3seq.sty)
(/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3int.sty)
(/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3quark.sty)
(/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3prg.sty)
(/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3clist.sty)
(/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3token.sty)
(/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3prop.sty)
(/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3msg.sty)
(/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3file.sty)
(/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3skip.sty)
(/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3keys.sty)
(/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3fp.sty)
(/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3box.sty)
(/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3coffins.sty)
(/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3color.sty)
(/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3luatex.sty))
(/usr/local/texlive/2012/texmf-dist/tex/latex/l3packages/xparse/xparse.st
y)
(/usr/local/texlive/2012/texmf-dist/tex/latex/fontspec/fontspec-patches.s
ty
(/usr/local/texlive/2012/texmf-dist/tex/latex/base/fixltx2e.sty)
*************************************************
* LaTeX warning: "xparse/redefine-command"
* 
* Redefining document command \oldstylenums with arg. spec. 'm' on line 
107.
*************************************************
) 
(/usr/local/texlive/2012/texmf-dist/tex/latex/fontspec/fontspec-xetex.sty
(/usr/local/texlive/2012/texmf-dist/tex/latex/base/fontenc.sty
(/usr/local/texlive/2012/texmf-dist/tex/latex/euenc/eu1enc.def)
(/usr/local/texlive/2012/texmf-dist/tex/latex/euenc/eu1lmr.fd))
(/usr/local/texlive/2012/texmf-dist/tex/xelatex/xunicode/xunicode.sty
(/usr/local/texlive/2012/texmf-dist/tex/latex/tipa/t3enc.def
(/usr/local/texlive/2012/texmf-dist/tex/latex/euenc/eu1lmss.fd))
(/usr/local/texlive/2012/texmf-dist/tex/latex/graphics/graphicx.sty
(/usr/local/texlive/2012/texmf-dist/tex/latex/graphics/keyval.sty)))
(/usr/local/texlive/2012/texmf-dist/tex/latex/fontspec/fontspec.cfg)))

!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
!
! fontspec error: "font-not-found"
! 
! The font "Bitstream Vera Serif" cannot be found.
! 
! See the fontspec documentation for further information.
! 
! For immediate help type H <return>.
!...............................................  
                                                  
<*> \setmainfont{Bitstream Vera Serif}
                                      
No pages of output.
Transcript written on texput.log.


======================================================================
ERROR: matplotlib.tests.test_backend_pgf.test_mixedmode
----------------------------------------------------------------------
Traceback (most recent call last):
  File 
"/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
kages/nose/case.py", line 197, in runTest
    self.test(*self.arg)
  File 
"/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
kages/matplotlib/tests/test_backend_pgf.py", line 45, in backend_switcher
    result = func(*args, **kwargs)
  File 
"/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
kages/matplotlib/tests/test_backend_pgf.py", line 158, in test_mixedmode
    compare_figure('pgf_mixedmode.pdf')
  File 
"/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
kages/matplotlib/tests/test_backend_pgf.py", line 56, in compare_figure
    plt.savefig(actual)
  File 
"/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
kages/matplotlib/pyplot.py", line 561, in savefig
    return fig.savefig(*args, **kwargs)
  File 
"/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
kages/matplotlib/figure.py", line 1421, in savefig
    self.canvas.print_figure(*args, **kwargs)
  File 
"/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
kages/matplotlib/backend_bases.py", line 2220, in print_figure
    **kwargs)
  File 
"/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
kages/matplotlib/backends/backend_pgf.py", line 865, in print_pdf
    self._print_pdf_to_fh(fh, *args, **kwargs)
  File 
"/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
kages/matplotlib/backends/backend_pgf.py", line 823, in _print_pdf_to_fh
    self.print_pgf(fname_pgf, *args, **kwargs)
  File 
"/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
kages/matplotlib/backends/backend_pgf.py", line 805, in print_pgf
    self._print_pgf_to_fh(fh, *args, **kwargs)
  File 
"/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
kages/matplotlib/backends/backend_pgf.py", line 785, in _print_pgf_to_fh
    RendererPgf(self.figure, fh),
  File 
"/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
kages/matplotlib/backends/backend_pgf.py", line 409, in __init__
    self.latexManager = LatexManagerFactory.get_latex_manager()
  File 
"/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
kages/matplotlib/backends/backend_pgf.py", line 223, in get_latex_manager
    new_inst = LatexManager()
  File 
"/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
kages/matplotlib/backends/backend_pgf.py", line 309, in __init__
    raise LatexError("LaTeX returned an error, probably missing font or 
error in preamble:\n%s" % stdout)
LatexError: LaTeX returned an error, probably missing font or error in 
preamble:
This is XeTeX, Version 3.1415926-2.4-0.9998 (TeX Live 2012)
 restricted \write18 enabled.
**entering extended mode
LaTeX2e <2011/06/27>
Babel <v3.8m> and hyphenation patterns for english, dumylang, 
nohyphenation, ge
rman-x-2012-05-30, ngerman-x-2012-05-30, afrikaans, ancientgreek, 
ibycus, arabi
c, armenian, basque, bulgarian, catalan, pinyin, coptic, croatian, 
czech, danis
h, dutch, ukenglish, usenglishmax, esperanto, estonian, ethiopic, farsi, 
finnis
h, french, friulan, galician, german, ngerman, swissgerman, monogreek, 
greek, h
ungarian, icelandic, assamese, bengali, gujarati, hindi, kannada, 
malayalam, ma
rathi, oriya, panjabi, tamil, telugu, indonesian, interlingua, irish, 
italian, 
kurmanji, latin, latvian, lithuanian, mongolian, mongolianlmc, bokmal, 
nynorsk,
 polish, portuguese, romanian, romansh, russian, sanskrit, serbian, 
serbianc, s
lovak, slovenian, spanish, swedish, turkish, turkmen, ukrainian, 
uppersorbian, 
welsh, loaded.

*(/usr/local/texlive/2012/texmf-dist/tex/latex/base/minimal.cls
Document Class: minimal 2001/05/25 Standard LaTeX minimal class
)
(Please type a command or say `\end')
*
*(/usr/local/texlive/2012/texmf-dist/tex/latex/fontspec/fontspec.sty
(/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/expl3.sty
(/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3names.sty
(/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3bootstrap.sty))
(/usr/local/texlive/2012/texmf-dist/tex/latex/etex-pkg/etex.sty)
(/usr/local/texlive/2012/texmf-dist/tex/latex/graphics/color.sty
(/usr/local/texlive/2012/texmf-dist/tex/latex/latexconfig/color.cfg)
(/usr/local/texlive/2012/texmf-dist/tex/xelatex/xetex-def/xetex.def))
(/usr/local/texlive/2012/texmf-dist/tex/latex/graphics/graphics.sty
(/usr/local/texlive/2012/texmf-dist/tex/latex/graphics/trig.sty)
(/usr/local/texlive/2012/texmf-dist/tex/latex/latexconfig/graphics.cfg))
(/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3basics.sty)
(/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3expan.sty)
(/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3tl.sty)
(/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3seq.sty)
(/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3int.sty)
(/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3quark.sty)
(/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3prg.sty)
(/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3clist.sty)
(/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3token.sty)
(/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3prop.sty)
(/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3msg.sty)
(/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3file.sty)
(/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3skip.sty)
(/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3keys.sty)
(/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3fp.sty)
(/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3box.sty)
(/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3coffins.sty)
(/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3color.sty)
(/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3luatex.sty))
(/usr/local/texlive/2012/texmf-dist/tex/latex/l3packages/xparse/xparse.st
y)
(/usr/local/texlive/2012/texmf-dist/tex/latex/fontspec/fontspec-patches.s
ty
(/usr/local/texlive/2012/texmf-dist/tex/latex/base/fixltx2e.sty)
*************************************************
* LaTeX warning: "xparse/redefine-command"
* 
* Redefining document command \oldstylenums with arg. spec. 'm' on line 
107.
*************************************************
) 
(/usr/local/texlive/2012/texmf-dist/tex/latex/fontspec/fontspec-xetex.sty
(/usr/local/texlive/2012/texmf-dist/tex/latex/base/fontenc.sty
(/usr/local/texlive/2012/texmf-dist/tex/latex/euenc/eu1enc.def)
(/usr/local/texlive/2012/texmf-dist/tex/latex/euenc/eu1lmr.fd))
(/usr/local/texlive/2012/texmf-dist/tex/xelatex/xunicode/xunicode.sty
(/usr/local/texlive/2012/texmf-dist/tex/latex/tipa/t3enc.def
(/usr/local/texlive/2012/texmf-dist/tex/latex/euenc/eu1lmss.fd))
(/usr/local/texlive/2012/texmf-dist/tex/latex/graphics/graphicx.sty
(/usr/local/texlive/2012/texmf-dist/tex/latex/graphics/keyval.sty)))
(/usr/local/texlive/2012/texmf-dist/tex/latex/fontspec/fontspec.cfg)))

!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
!
! fontspec error: "font-not-found"
! 
! The font "Bitstream Vera Serif" cannot be found.
! 
! See the fontspec documentation for further information.
! 
! For immediate help type H <return>.
!...............................................  
                                                  
<*> \setmainfont{Bitstream Vera Serif}
                                      
No pages of output.
Transcript written on texput.log.


======================================================================
FAIL: matplotlib.tests.test_backend_pdf.test_use14corefonts.test
----------------------------------------------------------------------
Traceback (most recent call last):
  File 
"/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
kages/nose/case.py", line 197, in runTest
    self.test(*self.arg)
  File 
"/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
kages/matplotlib/testing/decorators.py", line 40, in failer
    result = f(*args, **kwargs)
  File 
"/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
kages/matplotlib/testing/decorators.py", line 159, in do_test
    '(RMS %(rms).3f)'%err)
ImageComparisonFailure: images not close: 
/Users/rowen/result_images/test_backend_pdf/pdf_use14corefonts_pdf.png 
vs. 
/Users/rowen/result_images/test_backend_pdf/pdf_use14corefonts-expected_p
df.png (RMS 49.430)

======================================================================
FAIL: matplotlib.tests.test_text.test_font_styles.test
----------------------------------------------------------------------
Traceback (most recent call last):
  File 
"/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
kages/nose/case.py", line 197, in runTest
    self.test(*self.arg)
  File 
"/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
kages/matplotlib/testing/decorators.py", line 40, in failer
    result = f(*args, **kwargs)
  File 
"/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
kages/matplotlib/testing/decorators.py", line 159, in do_test
    '(RMS %(rms).3f)'%err)
ImageComparisonFailure: images not close: 
/Users/rowen/result_images/test_text/font_styles.png vs. 
/Users/rowen/result_images/test_text/font_styles-expected.png (RMS 
13.676)

======================================================================
FAIL: matplotlib.tests.test_text.test_font_styles.test
----------------------------------------------------------------------
Traceback (most recent call last):
  File 
"/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
kages/nose/case.py", line 197, in runTest
    self.test(*self.arg)
  File 
"/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
kages/matplotlib/testing/decorators.py", line 40, in failer
    result = f(*args, **kwargs)
  File 
"/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
kages/matplotlib/testing/decorators.py", line 159, in do_test
    '(RMS %(rms).3f)'%err)
ImageComparisonFailure: images not close: 
/Users/rowen/result_images/test_text/font_styles_pdf.png vs. 
/Users/rowen/result_images/test_text/font_styles-expected_pdf.png (RMS 
14.120)

----------------------------------------------------------------------
Ran 1458 tests in 715.550s

FAILED (KNOWNFAIL=2, errors=2, failures=3)
/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pack
ages/matplotlib/__init__.py:1141: UserWarning:  This call to 
matplotlib.use() has no effect
because the the backend has already been chosen;
matplotlib.use() must be called *before* pylab, matplotlib.pyplot,
or matplotlib.backends is imported for the first time.

  warnings.warn(_use_error_msg)
localhost$ 




------------

example of failure when building on 10.8 and running on 10.6:
Traceback (most recent call last):
  File 
"/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
kages/nose/loader.py", line 402, in loadTestsFromName
    module = resolve_name(addr.module)
  File 
"/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
kages/nose/util.py", line 321, in resolve_name
    obj = getattr(obj, part)
AttributeError: 'module' object has no attribute 'test_agg'

Re: [matplotlib-devel] 1.3.0rc5 tagged

From: Michael D. <md...@st...> - 2013-07-22 22:55:11

On 07/22/2013 05:59 PM, Russell E. Owen wrote:
> In article <51E...@st...>,
>   Michael Droettboom <md...@st...>
>   wrote:
>
>> At long last, I have a 1.3.0rc5 tagged.  I really hope to the software
>> deities that this is the last rc before final.
>>
>> If you wouldn't mind creating and posting the binaries, I'll make an
>> announcment on matplotlib-users, give this a week and then put final out.
> I have uploaded a binary for MacOS X 10.6 and later.
>
>
> There were a few oddities this time around:
> - matplotlib now requires pyparsing. I don't remember that being a
> requirement before -- even for previous 1.3 candidates.

It's been a requirement for time immemorial, but only in 1.3.0 (all of 
the release candidates) has it become an external dependency. What error 
occurred that suggests something changed?

>
> - I had a lot of trouble with matplotlib complaining that dateutil was
> not present, even though it was in my site-packages. So I tried to
> reinstall it using pip install -U dateutil. Unfortunately pip has never
> heard of "dateutil". After some searching I realized the package name is
> actually "python-dateutil" (and not dateutils, which is a different
> package, alas). Even then, I had to install/upgrade it twice -- for some
> reason matplotlib couldn't find it at first. Very puzzling. I have no
> idea what was going on, but also didn't want to spend a lot of time
> trying to debug it.

Does `python setup.py install` (of matplotlib) not install it 
automatically?  We are bearing all the pain of setuptools in order for 
that to happen, so if it's not, that's a real problem.

>
> - I get a few unit tests failures, including a slew of
> DeprecationWarnings about Operator '<<' that I don't remember seeing
> before. I have appended the test log.

That's probably related to pyparsing 2.0.1 (released just this week).  
I'd like to fix those warnings, but then we'd have to *require* 
pyparsing 2.0.1 (no earlier Python 2.x release of pyparsing includes an 
alternative syntax).  I think pyparsing moved too quickly on this one, 
but I'm not sure what we can do about it. It does make me long for the 
days when we included our dependencies so we have some control over this 
stuff.

>
> - I first tried building on 10.8 and running on 10.6 (since that's much
> simpler for me). Unfortunately it doesn't work; on 10.6 it acts as if
> the unit tests themselves aren't part of the package. I have no idea
> why. I appended a log snippet showing the basic message, but I haven't
> looked into it further. This sounds worth spending some time tracking
> down.

That's a puzzler.  I've seen that crop up on Travis erratically as well, 
but not consistently.  It's not clear what's going on here -- will have 
to think on it.

Thanks for all of your work on this!

Mike

>
> -- Russell
>
>
> Log of unit tests, with a few \n inserted for readability.
> This is for a package built on 10.6 and running on 10.8.
>
> python -c "import matplotlib as m ; m.test(verbosity=1)"
> .........................................................
> /Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pack
> ages/matplotlib/mathtext.py:2182: DeprecationWarning: Operator '<<' is
> deprecated, use '<<=' instead
>    float_literal << Regex(r"[-+]?([0-9]+\.?[0-9]*|\.[0-9]+)")
> /Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pack
> ages/matplotlib/mathtext.py:2183: DeprecationWarning: Operator '<<' is
> deprecated, use '<<=' instead
>    int_literal   << Regex("[-+]?[0-9]+")
> /Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pack
> ages/matplotlib/mathtext.py:2185: DeprecationWarning: Operator '<<' is
> deprecated, use '<<=' instead
>    lbrace        << Literal('{').suppress()
> ...(and 40-odd more examples of the same that I omitted)...
> /Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pack
> ages/matplotlib/mathtext.py:2319: DeprecationWarning: Operator '<<' is
> deprecated, use '<<=' instead
>    main          << (non_math + ZeroOrMore(math_string + non_math)) +
> StringEnd()
> .........................................................................
> .........................................................................
> ......................
> /Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pack
> ages/matplotlib/font_manager.py:1236: UserWarning: findfont: Font family
> ['sans-serif'] not found. Falling back to Helvetica
>    (prop.get_family(), self.defaultFamily[fontext]))
> /Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pack
> ages/matplotlib/font_manager.py:1246: UserWarning: findfont: Could not
> match
> :family=Helvetica:style=normal:variant=normal:weight=normal:stretch=norma
> l:size=medium. Returning
> /Applications/TUI.app/Contents/Resources/mpl-data/fonts/afm/putri8a.afm
>    UserWarning)
> /Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pack
> ages/matplotlib/font_manager.py:1246: UserWarning: findfont: Could not
> match
> :family=Helvetica:style=normal:variant=normal:weight=normal:stretch=norma
> l:size=24.0. Returning
> /Applications/TUI.app/Contents/Resources/mpl-data/fonts/afm/putri8a.afm
>    UserWarning)
> /Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pack
> ages/matplotlib/font_manager.py:1246: UserWarning: findfont: Could not
> match
> :family=Helvetica:style=normal:variant=normal:weight=normal:stretch=norma
> l:size=large. Returning
> /Applications/TUI.app/Contents/Resources/mpl-data/fonts/afm/putri8a.afm
>    UserWarning)
> F...kpathsea: Invalid fontname `Bitstream Vera Serif', contains ' '
> Ekpathsea: Invalid fontname `Bitstream Vera Serif', contains ' '
> EK.....K.................................................................
> .........................................................................
> .........................................................................
> .........................................................................
> .........................................................................
> .........................................................................
> .........................................................................
> .........................................................................
> .........................................................................
> .........................................................................
> .........................................................................
> .........................................................................
> .........................................................................
> .........................................................................
> .........................................................................
> .....................................
> /Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pack
> ages/numpy/ma/core.py:777: RuntimeWarning: invalid value encountered in
> absolute
>    return umath.absolute(a) * self.tolerance >= umath.absolute(b)
> /Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pack
> ages/numpy/ma/core.py:3791: UserWarning: Warning: converting a masked
> element to nan.
>    warnings.warn("Warning: converting a masked element to nan.")
> ...............
> /Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pack
> ages/matplotlib/font_manager.py:1236: UserWarning: findfont: Font family
> ['sans-serif'] not found. Falling back to Bitstream Vera Sans
>    (prop.get_family(), self.defaultFamily[fontext]))
> /Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pack
> ages/matplotlib/font_manager.py:1246: UserWarning: findfont: Could not
> match :family=Bitstream Vera
> Sans:style=normal:variant=normal:weight=normal:stretch=normal:size=14.0.
> Returning
> /Applications/TUI.app/Contents/Resources/mpl-data/fonts/ttf/Vera.ttf
>    UserWarning)
> /Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pack
> ages/matplotlib/font_manager.py:1246: UserWarning: findfont: Could not
> match :family=Bitstream Vera
> Sans:style=normal:variant=normal:weight=bold:stretch=500:size=14.0.
> Returning
> /Applications/TUI.app/Contents/Resources/mpl-data/fonts/ttf/Vera.ttf
>    UserWarning)
> /Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pack
> ages/matplotlib/font_manager.py:1236: UserWarning: findfont: Font family
> ['sans serif'] not found. Falling back to Bitstream Vera Sans
>    (prop.get_family(), self.defaultFamily[fontext]))
> /Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pack
> ages/matplotlib/font_manager.py:1246: UserWarning: findfont: Could not
> match :family=Bitstream Vera
> Sans:style=italic:variant=normal:weight=750:stretch=500:size=14.0.
> Returning
> /Applications/TUI.app/Contents/Resources/mpl-data/fonts/ttf/Vera.ttf
>    UserWarning)
> /Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pack
> ages/matplotlib/font_manager.py:1246: UserWarning: findfont: Could not
> match :family=Bitstream Vera
> Sans:style=normal:variant=normal:weight=200:stretch=500:size=14.0.
> Returning
> /Applications/TUI.app/Contents/Resources/mpl-data/fonts/ttf/Vera.ttf
>    UserWarning)
> /Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pack
> ages/matplotlib/font_manager.py:1246: UserWarning: findfont: Could not
> match :family=Bitstream Vera
> Sans:style=normal:variant=normal:weight=500:stretch=100:size=14.0.
> Returning
> /Applications/TUI.app/Contents/Resources/mpl-data/fonts/ttf/Vera.ttf
>    UserWarning)
> FF...........................
> /Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pack
> ages/matplotlib/gridspec.py:298: UserWarning: This figure includes Axes
> that are not compatible with tight_layout, so its results might be
> incorrect.
>    warnings.warn("This figure includes Axes that are not "
> ............................................
> /Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pack
> ages/numpy/testing/utils.py:807: RuntimeWarning: invalid value
> encountered in absolute
>    z = abs(x-y)
> ........
> ======================================================================
> ERROR: matplotlib.tests.test_backend_pgf.test_pathclip
> ----------------------------------------------------------------------
> Traceback (most recent call last):
>    File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
> kages/nose/case.py", line 197, in runTest
>      self.test(*self.arg)
>    File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
> kages/matplotlib/tests/test_backend_pgf.py", line 45, in backend_switcher
>      result = func(*args, **kwargs)
>    File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
> kages/matplotlib/tests/test_backend_pgf.py", line 146, in test_pathclip
>      plt.savefig(os.path.join(result_dir, "pgf_pathclip.pdf"))
>    File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
> kages/matplotlib/pyplot.py", line 561, in savefig
>      return fig.savefig(*args, **kwargs)
>    File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
> kages/matplotlib/figure.py", line 1421, in savefig
>      self.canvas.print_figure(*args, **kwargs)
>    File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
> kages/matplotlib/backend_bases.py", line 2220, in print_figure
>      **kwargs)
>    File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
> kages/matplotlib/backends/backend_pgf.py", line 865, in print_pdf
>      self._print_pdf_to_fh(fh, *args, **kwargs)
>    File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
> kages/matplotlib/backends/backend_pgf.py", line 823, in _print_pdf_to_fh
>      self.print_pgf(fname_pgf, *args, **kwargs)
>    File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
> kages/matplotlib/backends/backend_pgf.py", line 805, in print_pgf
>      self._print_pgf_to_fh(fh, *args, **kwargs)
>    File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
> kages/matplotlib/backends/backend_pgf.py", line 785, in _print_pgf_to_fh
>      RendererPgf(self.figure, fh),
>    File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
> kages/matplotlib/backends/backend_pgf.py", line 409, in __init__
>      self.latexManager = LatexManagerFactory.get_latex_manager()
>    File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
> kages/matplotlib/backends/backend_pgf.py", line 223, in get_latex_manager
>      new_inst = LatexManager()
>    File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
> kages/matplotlib/backends/backend_pgf.py", line 309, in __init__
>      raise LatexError("LaTeX returned an error, probably missing font or
> error in preamble:\n%s" % stdout)
> LatexError: LaTeX returned an error, probably missing font or error in
> preamble:
> This is XeTeX, Version 3.1415926-2.4-0.9998 (TeX Live 2012)
>   restricted \write18 enabled.
> **entering extended mode
> LaTeX2e <2011/06/27>
> Babel <v3.8m> and hyphenation patterns for english, dumylang,
> nohyphenation, ge
> rman-x-2012-05-30, ngerman-x-2012-05-30, afrikaans, ancientgreek,
> ibycus, arabi
> c, armenian, basque, bulgarian, catalan, pinyin, coptic, croatian,
> czech, danis
> h, dutch, ukenglish, usenglishmax, esperanto, estonian, ethiopic, farsi,
> finnis
> h, french, friulan, galician, german, ngerman, swissgerman, monogreek,
> greek, h
> ungarian, icelandic, assamese, bengali, gujarati, hindi, kannada,
> malayalam, ma
> rathi, oriya, panjabi, tamil, telugu, indonesian, interlingua, irish,
> italian,
> kurmanji, latin, latvian, lithuanian, mongolian, mongolianlmc, bokmal,
> nynorsk,
>   polish, portuguese, romanian, romansh, russian, sanskrit, serbian,
> serbianc, s
> lovak, slovenian, spanish, swedish, turkish, turkmen, ukrainian,
> uppersorbian,
> welsh, loaded.
>
> *(/usr/local/texlive/2012/texmf-dist/tex/latex/base/minimal.cls
> Document Class: minimal 2001/05/25 Standard LaTeX minimal class
> )
> (Please type a command or say `\end')
> *
> *(/usr/local/texlive/2012/texmf-dist/tex/latex/fontspec/fontspec.sty
> (/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/expl3.sty
> (/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3names.sty
> (/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3bootstrap.sty))
> (/usr/local/texlive/2012/texmf-dist/tex/latex/etex-pkg/etex.sty)
> (/usr/local/texlive/2012/texmf-dist/tex/latex/graphics/color.sty
> (/usr/local/texlive/2012/texmf-dist/tex/latex/latexconfig/color.cfg)
> (/usr/local/texlive/2012/texmf-dist/tex/xelatex/xetex-def/xetex.def))
> (/usr/local/texlive/2012/texmf-dist/tex/latex/graphics/graphics.sty
> (/usr/local/texlive/2012/texmf-dist/tex/latex/graphics/trig.sty)
> (/usr/local/texlive/2012/texmf-dist/tex/latex/latexconfig/graphics.cfg))
> (/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3basics.sty)
> (/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3expan.sty)
> (/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3tl.sty)
> (/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3seq.sty)
> (/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3int.sty)
> (/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3quark.sty)
> (/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3prg.sty)
> (/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3clist.sty)
> (/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3token.sty)
> (/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3prop.sty)
> (/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3msg.sty)
> (/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3file.sty)
> (/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3skip.sty)
> (/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3keys.sty)
> (/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3fp.sty)
> (/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3box.sty)
> (/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3coffins.sty)
> (/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3color.sty)
> (/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3luatex.sty))
> (/usr/local/texlive/2012/texmf-dist/tex/latex/l3packages/xparse/xparse.st
> y)
> (/usr/local/texlive/2012/texmf-dist/tex/latex/fontspec/fontspec-patches.s
> ty
> (/usr/local/texlive/2012/texmf-dist/tex/latex/base/fixltx2e.sty)
> *************************************************
> * LaTeX warning: "xparse/redefine-command"
> *
> * Redefining document command \oldstylenums with arg. spec. 'm' on line
> 107.
> *************************************************
> )
> (/usr/local/texlive/2012/texmf-dist/tex/latex/fontspec/fontspec-xetex.sty
> (/usr/local/texlive/2012/texmf-dist/tex/latex/base/fontenc.sty
> (/usr/local/texlive/2012/texmf-dist/tex/latex/euenc/eu1enc.def)
> (/usr/local/texlive/2012/texmf-dist/tex/latex/euenc/eu1lmr.fd))
> (/usr/local/texlive/2012/texmf-dist/tex/xelatex/xunicode/xunicode.sty
> (/usr/local/texlive/2012/texmf-dist/tex/latex/tipa/t3enc.def
> (/usr/local/texlive/2012/texmf-dist/tex/latex/euenc/eu1lmss.fd))
> (/usr/local/texlive/2012/texmf-dist/tex/latex/graphics/graphicx.sty
> (/usr/local/texlive/2012/texmf-dist/tex/latex/graphics/keyval.sty)))
> (/usr/local/texlive/2012/texmf-dist/tex/latex/fontspec/fontspec.cfg)))
>
> !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
> !
> ! fontspec error: "font-not-found"
> !
> ! The font "Bitstream Vera Serif" cannot be found.
> !
> ! See the fontspec documentation for further information.
> !
> ! For immediate help type H <return>.
> !...............................................
>                                                    
> <*> \setmainfont{Bitstream Vera Serif}
>                                        
> No pages of output.
> Transcript written on texput.log.
>
>
> ======================================================================
> ERROR: matplotlib.tests.test_backend_pgf.test_mixedmode
> ----------------------------------------------------------------------
> Traceback (most recent call last):
>    File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
> kages/nose/case.py", line 197, in runTest
>      self.test(*self.arg)
>    File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
> kages/matplotlib/tests/test_backend_pgf.py", line 45, in backend_switcher
>      result = func(*args, **kwargs)
>    File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
> kages/matplotlib/tests/test_backend_pgf.py", line 158, in test_mixedmode
>      compare_figure('pgf_mixedmode.pdf')
>    File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
> kages/matplotlib/tests/test_backend_pgf.py", line 56, in compare_figure
>      plt.savefig(actual)
>    File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
> kages/matplotlib/pyplot.py", line 561, in savefig
>      return fig.savefig(*args, **kwargs)
>    File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
> kages/matplotlib/figure.py", line 1421, in savefig
>      self.canvas.print_figure(*args, **kwargs)
>    File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
> kages/matplotlib/backend_bases.py", line 2220, in print_figure
>      **kwargs)
>    File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
> kages/matplotlib/backends/backend_pgf.py", line 865, in print_pdf
>      self._print_pdf_to_fh(fh, *args, **kwargs)
>    File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
> kages/matplotlib/backends/backend_pgf.py", line 823, in _print_pdf_to_fh
>      self.print_pgf(fname_pgf, *args, **kwargs)
>    File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
> kages/matplotlib/backends/backend_pgf.py", line 805, in print_pgf
>      self._print_pgf_to_fh(fh, *args, **kwargs)
>    File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
> kages/matplotlib/backends/backend_pgf.py", line 785, in _print_pgf_to_fh
>      RendererPgf(self.figure, fh),
>    File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
> kages/matplotlib/backends/backend_pgf.py", line 409, in __init__
>      self.latexManager = LatexManagerFactory.get_latex_manager()
>    File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
> kages/matplotlib/backends/backend_pgf.py", line 223, in get_latex_manager
>      new_inst = LatexManager()
>    File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
> kages/matplotlib/backends/backend_pgf.py", line 309, in __init__
>      raise LatexError("LaTeX returned an error, probably missing font or
> error in preamble:\n%s" % stdout)
> LatexError: LaTeX returned an error, probably missing font or error in
> preamble:
> This is XeTeX, Version 3.1415926-2.4-0.9998 (TeX Live 2012)
>   restricted \write18 enabled.
> **entering extended mode
> LaTeX2e <2011/06/27>
> Babel <v3.8m> and hyphenation patterns for english, dumylang,
> nohyphenation, ge
> rman-x-2012-05-30, ngerman-x-2012-05-30, afrikaans, ancientgreek,
> ibycus, arabi
> c, armenian, basque, bulgarian, catalan, pinyin, coptic, croatian,
> czech, danis
> h, dutch, ukenglish, usenglishmax, esperanto, estonian, ethiopic, farsi,
> finnis
> h, french, friulan, galician, german, ngerman, swissgerman, monogreek,
> greek, h
> ungarian, icelandic, assamese, bengali, gujarati, hindi, kannada,
> malayalam, ma
> rathi, oriya, panjabi, tamil, telugu, indonesian, interlingua, irish,
> italian,
> kurmanji, latin, latvian, lithuanian, mongolian, mongolianlmc, bokmal,
> nynorsk,
>   polish, portuguese, romanian, romansh, russian, sanskrit, serbian,
> serbianc, s
> lovak, slovenian, spanish, swedish, turkish, turkmen, ukrainian,
> uppersorbian,
> welsh, loaded.
>
> *(/usr/local/texlive/2012/texmf-dist/tex/latex/base/minimal.cls
> Document Class: minimal 2001/05/25 Standard LaTeX minimal class
> )
> (Please type a command or say `\end')
> *
> *(/usr/local/texlive/2012/texmf-dist/tex/latex/fontspec/fontspec.sty
> (/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/expl3.sty
> (/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3names.sty
> (/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3bootstrap.sty))
> (/usr/local/texlive/2012/texmf-dist/tex/latex/etex-pkg/etex.sty)
> (/usr/local/texlive/2012/texmf-dist/tex/latex/graphics/color.sty
> (/usr/local/texlive/2012/texmf-dist/tex/latex/latexconfig/color.cfg)
> (/usr/local/texlive/2012/texmf-dist/tex/xelatex/xetex-def/xetex.def))
> (/usr/local/texlive/2012/texmf-dist/tex/latex/graphics/graphics.sty
> (/usr/local/texlive/2012/texmf-dist/tex/latex/graphics/trig.sty)
> (/usr/local/texlive/2012/texmf-dist/tex/latex/latexconfig/graphics.cfg))
> (/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3basics.sty)
> (/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3expan.sty)
> (/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3tl.sty)
> (/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3seq.sty)
> (/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3int.sty)
> (/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3quark.sty)
> (/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3prg.sty)
> (/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3clist.sty)
> (/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3token.sty)
> (/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3prop.sty)
> (/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3msg.sty)
> (/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3file.sty)
> (/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3skip.sty)
> (/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3keys.sty)
> (/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3fp.sty)
> (/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3box.sty)
> (/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3coffins.sty)
> (/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3color.sty)
> (/usr/local/texlive/2012/texmf-dist/tex/latex/l3kernel/l3luatex.sty))
> (/usr/local/texlive/2012/texmf-dist/tex/latex/l3packages/xparse/xparse.st
> y)
> (/usr/local/texlive/2012/texmf-dist/tex/latex/fontspec/fontspec-patches.s
> ty
> (/usr/local/texlive/2012/texmf-dist/tex/latex/base/fixltx2e.sty)
> *************************************************
> * LaTeX warning: "xparse/redefine-command"
> *
> * Redefining document command \oldstylenums with arg. spec. 'm' on line
> 107.
> *************************************************
> )
> (/usr/local/texlive/2012/texmf-dist/tex/latex/fontspec/fontspec-xetex.sty
> (/usr/local/texlive/2012/texmf-dist/tex/latex/base/fontenc.sty
> (/usr/local/texlive/2012/texmf-dist/tex/latex/euenc/eu1enc.def)
> (/usr/local/texlive/2012/texmf-dist/tex/latex/euenc/eu1lmr.fd))
> (/usr/local/texlive/2012/texmf-dist/tex/xelatex/xunicode/xunicode.sty
> (/usr/local/texlive/2012/texmf-dist/tex/latex/tipa/t3enc.def
> (/usr/local/texlive/2012/texmf-dist/tex/latex/euenc/eu1lmss.fd))
> (/usr/local/texlive/2012/texmf-dist/tex/latex/graphics/graphicx.sty
> (/usr/local/texlive/2012/texmf-dist/tex/latex/graphics/keyval.sty)))
> (/usr/local/texlive/2012/texmf-dist/tex/latex/fontspec/fontspec.cfg)))
>
> !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
> !
> ! fontspec error: "font-not-found"
> !
> ! The font "Bitstream Vera Serif" cannot be found.
> !
> ! See the fontspec documentation for further information.
> !
> ! For immediate help type H <return>.
> !...............................................
>                                                    
> <*> \setmainfont{Bitstream Vera Serif}
>                                        
> No pages of output.
> Transcript written on texput.log.
>
>
> ======================================================================
> FAIL: matplotlib.tests.test_backend_pdf.test_use14corefonts.test
> ----------------------------------------------------------------------
> Traceback (most recent call last):
>    File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
> kages/nose/case.py", line 197, in runTest
>      self.test(*self.arg)
>    File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
> kages/matplotlib/testing/decorators.py", line 40, in failer
>      result = f(*args, **kwargs)
>    File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
> kages/matplotlib/testing/decorators.py", line 159, in do_test
>      '(RMS %(rms).3f)'%err)
> ImageComparisonFailure: images not close:
> /Users/rowen/result_images/test_backend_pdf/pdf_use14corefonts_pdf.png
> vs.
> /Users/rowen/result_images/test_backend_pdf/pdf_use14corefonts-expected_p
> df.png (RMS 49.430)
>
> ======================================================================
> FAIL: matplotlib.tests.test_text.test_font_styles.test
> ----------------------------------------------------------------------
> Traceback (most recent call last):
>    File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
> kages/nose/case.py", line 197, in runTest
>      self.test(*self.arg)
>    File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
> kages/matplotlib/testing/decorators.py", line 40, in failer
>      result = f(*args, **kwargs)
>    File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
> kages/matplotlib/testing/decorators.py", line 159, in do_test
>      '(RMS %(rms).3f)'%err)
> ImageComparisonFailure: images not close:
> /Users/rowen/result_images/test_text/font_styles.png vs.
> /Users/rowen/result_images/test_text/font_styles-expected.png (RMS
> 13.676)
>
> ======================================================================
> FAIL: matplotlib.tests.test_text.test_font_styles.test
> ----------------------------------------------------------------------
> Traceback (most recent call last):
>    File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
> kages/nose/case.py", line 197, in runTest
>      self.test(*self.arg)
>    File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
> kages/matplotlib/testing/decorators.py", line 40, in failer
>      result = f(*args, **kwargs)
>    File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
> kages/matplotlib/testing/decorators.py", line 159, in do_test
>      '(RMS %(rms).3f)'%err)
> ImageComparisonFailure: images not close:
> /Users/rowen/result_images/test_text/font_styles_pdf.png vs.
> /Users/rowen/result_images/test_text/font_styles-expected_pdf.png (RMS
> 14.120)
>
> ----------------------------------------------------------------------
> Ran 1458 tests in 715.550s
>
> FAILED (KNOWNFAIL=2, errors=2, failures=3)
> /Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pack
> ages/matplotlib/__init__.py:1141: UserWarning:  This call to
> matplotlib.use() has no effect
> because the the backend has already been chosen;
> matplotlib.use() must be called *before* pylab, matplotlib.pyplot,
> or matplotlib.backends is imported for the first time.
>
>    warnings.warn(_use_error_msg)
> localhost$
>
>
>
>
> ------------
>
> example of failure when building on 10.8 and running on 10.6:
> Traceback (most recent call last):
>    File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
> kages/nose/loader.py", line 402, in loadTestsFromName
>      module = resolve_name(addr.module)
>    File
> "/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-pac
> kages/nose/util.py", line 321, in resolve_name
>      obj = getattr(obj, part)
> AttributeError: 'module' object has no attribute 'test_agg'
>
>
> ------------------------------------------------------------------------------
> See everything from the browser to the database with AppDynamics
> Get end-to-end visibility with application monitoring from AppDynamics
> Isolate bottlenecks and diagnose root cause in seconds.
> Start your free trial of AppDynamics Pro today!
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Re: [matplotlib-devel] 1.3.0rc5 tagged

From: Benjamin R. <ben...@ou...> - 2013-07-23 19:33:49

Just checked out rc5 from git and did an install, and ran into a pyparsing
version check issue.  Turns out I completely forgot to do a "git clean
-fxd".  Doing that fixed the problem.  When we officially announce this,
perhaps it would be best to mention that command?  In addition, it would
probably be a good idea to include this tidbit into the INSTALL?

Cheers!
Ben Root

Re: [matplotlib-devel] 1.3.0rc5 tagged

From: Michiel de H. <mjl...@ya...> - 2013-07-24 03:16:28

I noticed that this release candidate will always skip the Mac OS X backend,
as the .check() method of BackendMacOSX in setupext.py returns None. Adding
    return "darwin"
or some other string solves the issue.
Also, if I am not mistaken, the files under lib/matplotlib/backends/Matplotlib.nib (as returned by the get_package_data() method of BackendMacOSX in setupext.py) are needed by the cocoaagg backend, not by the MacOSX backend.

Best,
-Michiel.
_______________________________________________

Matplotlib-devel mailing list
Mat...@li...
https://lists.sourceforge.net/lists/listinfo/matplotlib-devel

Re: [matplotlib-devel] 1.3.0rc5 tagged

From: Michael D. <md...@st...> - 2013-07-24 13:52:11

Would you mind testing https://github.com/matplotlib/matplotlib/pull/2250

On 07/23/2013 11:16 PM, Michiel de Hoon wrote:
> I noticed that this release candidate will always skip the Mac OS X 
> backend,
> as the .check() method of BackendMacOSX in setupext.py returns None. 
> Adding
>     return "darwin"
> or some other string solves the issue.
> Also, if I am not mistaken, the files under 
> lib/matplotlib/backends/Matplotlib.nib (as returned by the 
> get_package_data() method of BackendMacOSX in setupext.py) are needed 
> by the cocoaagg backend, not by the MacOSX backend.

Re: [matplotlib-devel] 1.3.0rc5 tagged

From: Michael D. <md...@st...> - 2013-07-24 13:43:31

Thanks.  I will address these issues before final.

None of this is new -- we've gone through 5 release candidates over many 
weeks.  Why is this just coming to light now?

Mike

On 07/23/2013 11:16 PM, Michiel de Hoon wrote:
> I noticed that this release candidate will always skip the Mac OS X 
> backend,
> as the .check() method of BackendMacOSX in setupext.py returns None. 
> Adding
>     return "darwin"
> or some other string solves the issue.
> Also, if I am not mistaken, the files under 
> lib/matplotlib/backends/Matplotlib.nib (as returned by the 
> get_package_data() method of BackendMacOSX in setupext.py) are needed 
> by the cocoaagg backend, not by the MacOSX backend.
>
> Best,
> -Michiel.
> _______________________________________________
> Matplotlib-devel mailing list
> Mat...@li... 
> <mailto:Mat...@li...>
> https://lists.sourceforge.net/lists/listinfo/matplotlib-devel
>
>

Re: [matplotlib-devel] 1.3.0rc5 tagged

From: Michael D. <md...@st...> - 2013-07-24 13:43:45

On 07/23/2013 03:33 PM, Benjamin Root wrote:
> Just checked out rc5 from git and did an install, and ran into a 
> pyparsing version check issue.

What was the issue?  Is it that you had 2.0.1 which rc5 still considers 
to be incompatible with Python 2?  I'd like to know specifically what 
happened in case there's a deeper issue.

>   Turns out I completely forgot to do a "git clean -fxd". Doing that 
> fixed the problem.

Interesting.  I guess this would depend on what version you were on 
before the switch to rc5.  If 1.2.x, I'm not surprised (since pyparsing 
was included in the source tree then).  If master, I'm not sure what the 
cause would be.

>   When we officially announce this, perhaps it would be best to 
> mention that command?  In addition, it would probably be a good idea 
> to include this tidbit into the INSTALL?

But that only applies to users of git (in which case this is very often 
an issue), and not users who download the tarball or package. I think it 
makes sense to add it to the developer docs, not the INSTALL docs.

Mike

Re: [matplotlib-devel] 1.3.0rc5 tagged

From: Benjamin R. <ben...@ou...> - 2013-07-24 14:45:57

On Wed, Jul 24, 2013 at 9:39 AM, Michael Droettboom <md...@st...> wrote:

>  On 07/23/2013 03:33 PM, Benjamin Root wrote:
>
>  Just checked out rc5 from git and did an install, and ran into a
> pyparsing version check issue.
>
>
> What was the issue?  Is it that you had 2.0.1 which rc5 still considers to
> be incompatible with Python 2?  I'd like to know specifically what happened
> in case there's a deeper issue.
>
>
>
It claimed I didn't meet the minimum pyparsing version needed when I tried
importing matplotlib after installing from source. However, importing
pyparsing on its own yielded a version slightly above the minimum (I forget
the actual numbers).  I had also just came from an build of an older
version of matplotlib.

Ben

Re: [matplotlib-devel] 1.3.0rc5 tagged

From: Chris B. <bea...@ha...> - 2013-07-24 14:57:45

Same with me. I had a stale pyparsing.pyc file in the MPL source directory
(presumably from an old MPL version) whose version # was too old. When mpl
tried to 'import pyparsing', it found that version, and raised an error. Of
course, if I tried "import pyparsing; print pyparsing.__version__" from my
home directory, python found a more recent pyparsing. So the error message
was a little confusing.

I only think this is going to effect people building from the Git source,
who have the old pyparsing.pyc file.


On Wed, Jul 24, 2013 at 10:45 AM, Benjamin Root <ben...@ou...> wrote:

>
>
>
> On Wed, Jul 24, 2013 at 9:39 AM, Michael Droettboom <md...@st...>wrote:
>
>>  On 07/23/2013 03:33 PM, Benjamin Root wrote:
>>
>>  Just checked out rc5 from git and did an install, and ran into a
>> pyparsing version check issue.
>>
>>
>> What was the issue?  Is it that you had 2.0.1 which rc5 still considers
>> to be incompatible with Python 2?  I'd like to know specifically what
>> happened in case there's a deeper issue.
>>
>>
>>
> It claimed I didn't meet the minimum pyparsing version needed when I tried
> importing matplotlib after installing from source. However, importing
> pyparsing on its own yielded a version slightly above the minimum (I forget
> the actual numbers).  I had also just came from an build of an older
> version of matplotlib.
>
> Ben
>
>
> ------------------------------------------------------------------------------
> See everything from the browser to the database with AppDynamics
> Get end-to-end visibility with application monitoring from AppDynamics
> Isolate bottlenecks and diagnose root cause in seconds.
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>
>


-- 
************************************
Chris Beaumont
Graduate Student
Institute for Astronomy
University of Hawaii at Manoa
2680 Woodlawn Drive
Honolulu, HI 96822
www.ifa.hawaii.edu/~beaumont
************************************

Re: [matplotlib-devel] 1.3.0rc5 tagged

From: Nelle V. <nel...@gm...> - 2013-07-24 15:21:37

We could update the makefile so that make clean really cleans up the
installation "junk" before installing a new version. I personnally would
find it very useful, but the makefile needs a bit of love. Typically "make"
would run make clean and make install.
I can work on that if people agree that having a nice makefile would be
useful.

Cheers,
N


On 24 July 2013 16:57, Chris Beaumont <bea...@ha...> wrote:

> Same with me. I had a stale pyparsing.pyc file in the MPL source directory
> (presumably from an old MPL version) whose version # was too old. When mpl
> tried to 'import pyparsing', it found that version, and raised an error. Of
> course, if I tried "import pyparsing; print pyparsing.__version__" from my
> home directory, python found a more recent pyparsing. So the error message
> was a little confusing.
>
> I only think this is going to effect people building from the Git source,
> who have the old pyparsing.pyc file.
>
>
> On Wed, Jul 24, 2013 at 10:45 AM, Benjamin Root <ben...@ou...> wrote:
>
>>
>>
>>
>> On Wed, Jul 24, 2013 at 9:39 AM, Michael Droettboom <md...@st...>wrote:
>>
>>>  On 07/23/2013 03:33 PM, Benjamin Root wrote:
>>>
>>>  Just checked out rc5 from git and did an install, and ran into a
>>> pyparsing version check issue.
>>>
>>>
>>> What was the issue?  Is it that you had 2.0.1 which rc5 still considers
>>> to be incompatible with Python 2?  I'd like to know specifically what
>>> happened in case there's a deeper issue.
>>>
>>>
>>>
>> It claimed I didn't meet the minimum pyparsing version needed when I
>> tried importing matplotlib after installing from source. However, importing
>> pyparsing on its own yielded a version slightly above the minimum (I forget
>> the actual numbers).  I had also just came from an build of an older
>> version of matplotlib.
>>
>> Ben
>>
>>
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>>
>
>
> --
> ************************************
> Chris Beaumont
> Graduate Student
> Institute for Astronomy
> University of Hawaii at Manoa
> 2680 Woodlawn Drive
> Honolulu, HI 96822
> www.ifa.hawaii.edu/~beaumont
> ************************************
>
>
> ------------------------------------------------------------------------------
> See everything from the browser to the database with AppDynamics
> Get end-to-end visibility with application monitoring from AppDynamics
> Isolate bottlenecks and diagnose root cause in seconds.
> Start your free trial of AppDynamics Pro today!
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> _______________________________________________
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>

Re: [matplotlib-devel] 1.3.0rc5 tagged

From: Michiel de H. <mjl...@ya...> - 2013-07-24 15:36:42

Hi Michael,

> Thanks.  I will address these issues before final.  


Thanks.

> None of this is new -- we've gone through 5 release candidates over many weeks.  Why is this just coming to light now?

The output of running "python setup.py build" passes by quickly, and people (including myself) did not notice that the MacOSX backend was not being compiled.

And then if an older version of matplotlib is already installed, everything seems to be working fine.
I noticed this problem today only because I was installing matplotlib on a new Macbook.

Best,
-Michiel.



________________________________
 From: Michael Droettboom <md...@st...>
To: Michiel de Hoon <mjl...@ya...> 
Cc: Benjamin Root <ben...@ou...>; "mat...@li..." <mat...@li...> 
Sent: Wednesday, July 24, 2013 10:36 PM
Subject: Re: [matplotlib-devel] 1.3.0rc5 tagged
 


Thanks.  I will address these issues before final.  

None of this is new -- we've gone through 5 release candidates
      over many weeks.  Why is this just coming to light now?

Mike

On 07/23/2013 11:16 PM, Michiel de Hoon wrote:

I noticed that this release candidate will always skip the Mac OS X backend,
>as the .check() method of BackendMacOSX in setupext.py returns
        None. Adding
>    return "darwin"
>or some other string solves the issue.
>Also, if I am not mistaken, the files under
        lib/matplotlib/backends/Matplotlib.nib (as returned by the
        get_package_data() method of BackendMacOSX in setupext.py) are
        needed by the cocoaagg backend, not by the MacOSX backend.
>
>Best,
>-Michiel.
>_______________________________________________
>
>Matplotlib-devel mailing list
>Mat...@li...
>https://lists.sourceforge.net/lists/listinfo/matplotlib-devel
>
>
>

Re: [matplotlib-devel] 1.3.0rc5 tagged

From: Michael D. <md...@st...> - 2013-07-24 15:51:23

On 07/24/2013 11:36 AM, Michiel de Hoon wrote:
> Hi Michael,
>
> > Thanks.  I will address these issues before final.
>
> Thanks.
>
> >None of this is new -- we've gone through 5 release candidates over 
> many weeks.  Why is this just coming to light now?
>
> The output of running "python setup.py build" passes by quickly, and 
> people (including myself) did not notice that the MacOSX backend was 
> not being compiled.
> And then if an older version of matplotlib is already installed, 
> everything seems to be working fine.
> I noticed this problem today only because I was installing matplotlib 
> on a new Macbook.

Ah, that makes sense.  Hopefully as part of doing some automated Mac 
builds we can be testing clean installs etc. and catch this kind of 
thing sooner in the future.

Mike

>
> Best,
> -Michiel.
>
> ------------------------------------------------------------------------
> *From:* Michael Droettboom <md...@st...>
> *To:* Michiel de Hoon <mjl...@ya...>
> *Cc:* Benjamin Root <ben...@ou...>; 
> "mat...@li..." 
> <mat...@li...>
> *Sent:* Wednesday, July 24, 2013 10:36 PM
> *Subject:* Re: [matplotlib-devel] 1.3.0rc5 tagged
>
> Thanks.  I will address these issues before final.
>
> None of this is new -- we've gone through 5 release candidates over 
> many weeks.  Why is this just coming to light now?
>
> Mike
>
> On 07/23/2013 11:16 PM, Michiel de Hoon wrote:
>> I noticed that this release candidate will always skip the Mac OS X 
>> backend,
>> as the .check() method of BackendMacOSX in setupext.py returns None. 
>> Adding
>>     return "darwin"
>> or some other string solves the issue.
>> Also, if I am not mistaken, the files under 
>> lib/matplotlib/backends/Matplotlib.nib (as returned by the 
>> get_package_data() method of BackendMacOSX in setupext.py) are needed 
>> by the cocoaagg backend, not by the MacOSX backend.
>>
>> Best,
>> -Michiel.
>> _______________________________________________
>> Matplotlib-devel mailing list
>> Mat...@li... 
>> <mailto:Mat...@li...>
>> https://lists.sourceforge.net/lists/listinfo/matplotlib-devel
>>
>>
>
>
>

Re: [matplotlib-devel] 1.3.0rc5 tagged

From: Russell E. O. <ro...@uw...> - 2013-07-24 19:17:54

In article <51E...@st...>,
 Michael Droettboom <md...@st...> 
 wrote:

> On 07/22/2013 05:59 PM, Russell E. Owen wrote:
> > In article <51E...@st...>,
> >   Michael Droettboom <md...@st...>
> >   wrote:
> >
> >> At long last, I have a 1.3.0rc5 tagged.  I really hope to the software
> >> deities that this is the last rc before final.
> >>
> >> If you wouldn't mind creating and posting the binaries, I'll make an
> >> announcment on matplotlib-users, give this a week and then put final out.
> > I have uploaded a binary for MacOS X 10.6 and later.
> >
> >
> > There were a few oddities this time around:
> > - matplotlib now requires pyparsing. I don't remember that being a
> > requirement before -- even for previous 1.3 candidates.
> 
> It's been a requirement for time immemorial, but only in 1.3.0 (all of 
> the release candidates) has it become an external dependency. What error 
> occurred that suggests something changed?

I suspect what changed is you don't include it anymore (but I would have 
expected that change in earlier 1.3.0 prereleases).

>> - I had a lot of trouble with matplotlib complaining that dateutil was
> > not present, even though it was in my site-packages. So I tried to
> > reinstall it using pip install -U dateutil. Unfortunately pip has never
> > heard of "dateutil". After some searching I realized the package name is
> > actually "python-dateutil" (and not dateutils, which is a different
> > package, alas). Even then, I had to install/upgrade it twice -- for some
> > reason matplotlib couldn't find it at first. Very puzzling. I have no
> > idea what was going on, but also didn't want to spend a lot of time
> > trying to debug it.
> 
> Does `python setup.py install` (of matplotlib) not install it 
> automatically?  We are bearing all the pain of setuptools in order for 
> that to happen, so if it's not, that's a real problem.

I am building a binary installer, so I don't use "python setup.py 
install". I use bdist_mpkg, which presumably does something similar to 
"python setup.py build" and packages the results (without installing 
them).

In any case, I need to know which packages matplotlib needs so I can 
warn users to install them in the binary installer's ReadMe file. The 
list is rather long. I miss having this stuff included in matplotlib. At 
this point I know of the following (aside from numpy):
- python-dateutil (unfortunately matplotlib complains about missing 
"dateutil" if it's absent; it would help to give the name of the package 
as known by pip, rather than what is imported)
- pytz
- six
- pyparsing

> > - I get a few unit tests failures, including a slew of
> > DeprecationWarnings about Operator '<<' that I don't remember seeing
> > before. I have appended the test log.
> 
> That's probably related to pyparsing 2.0.1 (released just this week).  
> I'd like to fix those warnings, but then we'd have to *require* 
> pyparsing 2.0.1 (no earlier Python 2.x release of pyparsing includes an 
> alternative syntax).  I think pyparsing moved too quickly on this one, 
> but I'm not sure what we can do about it. It does make me long for the 
> days when we included our dependencies so we have some control over this 
> stuff.

Great. This sounds innocuous.

> > - I first tried building on 10.8 and running on 10.6 (since that's much
> > simpler for me). Unfortunately it doesn't work; on 10.6 it acts as if
> > the unit tests themselves aren't part of the package. I have no idea
> > why. I appended a log snippet showing the basic message, but I haven't
> > looked into it further. This sounds worth spending some time tracking
> > down.
> 
> That's a puzzler.  I've seen that crop up on Travis erratically as well, 
> but not consistently.  It's not clear what's going on here -- will have 
> to think on it.

I'm not sure how to diagnose this, but if you have any ideas, let me 
know. (Though I should probably read the rest of the messages on this 
thread before saying that.)

-- Russell