Re: [Marsbar-users] ROI data extraction error

[Matthew B. <mat...@gm...>]

Hmm, I don't know.

Try:

D = mardo('SPM.mat');
names = image_names(D);
spm_vol(deblank(names(1,:)))

What happens then?

Matthew

On 8/28/07, karen lythe <kar...@ho...> wrote:
>
>
> Matt,
>
> The error is:
>
> All images in design appear to exist
> Design reporting                        :                        ...done
> Fetching data                           :                         1/1   ???
> Cant open image file.
>
> Error in ==> maroi.getdata at 103
>   data = spm_sample_vol(data_imgs(i),...
>
> Error in ==> maroi.get_marsy at 76
>   [y vals vXYZ mat]  = getdata(o, VY);
>
> Error in ==> marsbar at 975
> marsY = get_marsy(o{:}, VY, sumfunc, 'v');
>
> Error in ==> spm at 1601
> evalin('base',CBs{v-1})
>
> ??? Error while evaluating uicontrol Callback.
>
>
> Could the problem be that not only have i moved my time series but the
> SPM.mat for each subject as well?
>
> Thanks
>
> Karen
>
>
>
>
>
>
>
>
>  ________________________________
>  From: "Matthew Brett" <mat...@gm...>
> To: "karen lythe" <kar...@ho...>
> CC: mar...@li...
> Subject: Re: [Marsbar-users] ROI data extraction error
> Date: Tue, 28 Aug 2007 12:43:56 +0100
>
> >Hi,
> >
> >What is the error exactly?
> >
> >Best,
> >
> >Matthew
> >
> >On 8/28/07, karen lythe <kar...@ho...> wrote:
> > >
> > >
> > > Hi,
> > >
> > > I am having problems with MarsBaR when i try to 'extract ROI data'. I've
> > > seen on both the MarsBaR and SPM mailing lists that this is probably due
> to
> > > me moving files, so I have followed the steps from the FAQ regarding the
> > > error "can't open image file". Once i had specified where the files were
> i
> > > got the message that "all images in design appear to exist". I then went
> > > through the stages to extract the ROI data but get the same error. Any
> other
> > > ideas on what the problem may be?
> > >
> > > Thanks
> > >
> > > Karen
> > >
> > >
> > >
> > >
> > >
> > >
> > >
> > >
> > >
> > > ________________________________
> > > Got a favourite clothes shop, bar or restaurant? Share your local
> knowledge
> > > with BackOfMyHand.com
> > >
> -------------------------------------------------------------------------
> > > This SF.net email is sponsored by: Splunk Inc.
> > > Still grepping through log files to find problems? Stop.
> > > Now Search log events and configuration files using AJAX and a browser.
> > > Download your FREE copy of Splunk now >> http://get.splunk.com/
> > > _______________________________________________
> > > Marsbar-users mailing list
> > > Mar...@li...
> > >
> https://lists.sourceforge.net/lists/listinfo/marsbar-users
> > >
> > >
>
> ________________________________
> Got a favourite clothes shop, bar or restaurant? Share your local knowledge
> with BackOfMyHand.com
> -------------------------------------------------------------------------
> This SF.net email is sponsored by: Splunk Inc.
> Still grepping through log files to find problems?  Stop.
> Now Search log events and configuration files using AJAX and a browser.
> Download your FREE copy of Splunk now >>  http://get.splunk.com/
> _______________________________________________
> Marsbar-users mailing list
> Mar...@li...
> https://lists.sourceforge.net/lists/listinfo/marsbar-users
>
>