Re: [Marsbar-users] view an ROI overlaid on an anatomical image

[Ansgar F. <af...@so...>]

Hi Dianne,
I was about to mail Matthew about this. We encountered the same problem. I 
don't think you need to be concerned about this. The info is all there when 
you go for e.g. explore design. Also it displays the design summary once 
you are estimating your model. In other words the documentation is 
incorrect about this part but no worries otherwise!!!
Regards,
Ansgar

PS: Correct if I'm wrong Matthew...

At 03:56 PM 1/21/2005 -0700, dk...@em... wrote:
>Dear all,
>
>I've been trying out marsbar .37 and think I may be doing soething 
>wrong.  When
>I run through the tutorial data (or other data I use for testing) in spm99 or
>spm 2 and get to the section on page 22 where I am to "Set design from file",
>Marsbar does NOT display the design matrix.  It does not complain, I see no
>complaints at the prompt, it seems able to continue on from that step and
>select an roi and estimate results...but there is no design displayed. 
>Should I
>be concerned?  Or is the documentation incorrect?
>
>Thanks,
>
>Dianne
>
>Dianne K. Patterson Ph.D.
>Psychology, Room 217E
>626-4571
>Cognition and NeuroImaging Labs
>University of Arizona
>Tucson, AZ
>
>
>Quoting Matthew Brett <mat...@gm...>:
>
> > Hi,
> >
> > > Is there a way to view just one ROI overlaid on
> > > an (axial) slice of an anatomical image?
> > >
> > > The MarsBar allows us to view an ROI
> > > overlaid on an slice of the mean normalized image
> > > (by selecting "View" from the "ROI definition" menu).
> > > But we want to overlay just one ROI on an
> > > slice of an anatomical image of a participant,
> > > not on an slice of the MNI.
> >
> > I'm not sure I understand completely, but if you want to change the
> > image used for the ROI overlays (View), then go to Options, Edit,
> > Default structural, and choose another image,
> >
> > Best,
> >
> > Matthew
> >
> >
> > -------------------------------------------------------
> > This SF.Net email is sponsored by: IntelliVIEW -- Interactive Reporting
> > Tool for open source databases. Create drag-&-drop reports. Save time
> > by over 75%! Publish reports on the web. Export to DOC, XLS, RTF, etc.
> > Download a FREE copy at http://www.intelliview.com/go/osdn_nl
> > _______________________________________________
> > Marsbar-users mailing list
> > Mar...@li...
> > https://lists.sourceforge.net/lists/listinfo/marsbar-users
> >
>
>
>
>-------------------------------------------------------
>This SF.Net email is sponsored by: IntelliVIEW -- Interactive Reporting
>Tool for open source databases. Create drag-&-drop reports. Save time
>by over 75%! Publish reports on the web. Export to DOC, XLS, RTF, etc.
>Download a FREE copy at http://www.intelliview.com/go/osdn_nl
>_______________________________________________
>Marsbar-users mailing list
>Mar...@li...
>https://lists.sourceforge.net/lists/listinfo/marsbar-users

Ansgar Furst, Ph.D.
Research Fellow
Shimamura Lab
Department of Psychology (MC#1650)
University of California, Berkeley
Berkeley, CA 94720-1650
Lab Phone (510) 643-5371
FAX: (510) 642-5293
Email: af...@so...