Re: [maq-help] Sol2Sanger filters
Status: Beta
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From: Olivier H. <oh...@sc...> - 2007-12-07 01:25:35
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Thanks Heng, I will double check that. I have another question regarding the dump file from maq map : what is the number after the read name ? Is it the number of mismatches, the number of repeats ? What does 99 means ? I am trying to rescue those reads. Thanks for your answer Olivier On Dec 6, 2007, at 12:40 PM, Heng Li wrote: > Hello Olivier, > > Thanks for the feedback. If maq ran properly, no read would be > discarded. Maybe this was because maq got killed by chance, or the > input format was not correct? > > regards, > > Heng > > > On 6 Dec 2007, at 18:50, Olivier Harismendy wrote: > >> Hi >> >> I noticed that maq sol2sanger conversion get rid of some of my >> reads (around 15%). Any explanation ? >> >> Thanks >> >> Olivier >> >> >> --------------------------------------------------------------------- >> ---- >> SF.Net email is sponsored by: The Future of Linux Business White >> Paper >> from Novell. From the desktop to the data center, Linux is going >> mainstream. Let it simplify your IT future. >> http://altfarm.mediaplex.com/ad/ck/ >> 8857-50307-18918-4_______________________________________________ >> maq-help mailing list >> maq...@li... >> https://lists.sourceforge.net/lists/listinfo/maq-help > |