[maq-help] Depth limited to 255 ?

[Olivier H. <oh...@sc...>]

Hi

I have question regarding max depth. I know, through ELAND that most  
of my depth should be higher than 300, however Maq, and especially  
the output of cns2snp and cns2view shows a max read depth of 255 : is  
it because of the type variable used to calculate the depth ? Is  
there any way to get around it ?

Thanks

Olivier