[mamba-help] MAMBA Installation Issue

[M. J. T. I. <mj...@ud...>]

Dear Manuel A. Rivas,

Currently, we are trying to install MAMBA onto a HPC system called BioMix
at the University of Delaware, USA. It appears when we try to install/run
MAMBA there are module/package conflicts.

Message from Karol Maskiewicz (cc'ed on this email) who is the Manager of
the HPC system and who is installing MAMBA because of all the software
requirements.

"The problem is with Python's rpy2 module. Essentially, this module, which
communicates/uses R, does not work correctly. I've found similar reports
concerning rpy2 on-line. Unfortunately, there does not seem to by any
clear-cut solution offered to solve the problem. Essentially, it comes to
interaction and lack of some compatibility between system libraries (most
point to readline library), R, and Python module."

I was hoping you might be able to offer some suggestions on the
installation process.

I have also included my qsub scripts, data used (test set from website) and
all output messages, in case you need to see that information to know the
exact problem. If you need any further information, please feel free to
contact me.

Thank You,

M. Joseph Tomlinson IV