[mamba-help] Allele Specific Expression for Single Tissue

[Gaurav T. <gau...@gm...>]

Dear All,

I am trying to run Mamba on European ancestry samples from Geuvadis RNA-Seq
data.

I have created a file with heterozygous variant calls from RNA seq data and
converted into mamba format.

But as the dataset contain only single tissue, should the heterozygous
sites used in the analysis be from DNA seq data or RNA seq data?

Thank you for your help.


Regards

Gaurav Thareja