Re: [Libmesh-users] compiling libmesh on Cray

[Jim F. <jef...@gm...>]

Hi Minq,
Did you ever get this resolved? I am facing the same problem.
Thanks,
Jim


On Wed, Jul 10, 2013 at 5:55 PM, Minq Q <mi...@gm...> wrote:

> Hi,
>
> I am trying to compile libmesh on Cray XE6. Using GNU compiler.
>
> Then I got an error:
>
>   CC       ncgentab.o
>   CCLD     ncgen3
> /usr/bin/ld: attempted static link of dynamic object
> `../liblib/.libs/libnetcdf.so'
>
> Do you know, how can fix it?
>
> Thank you,
> / Ming Q.
>
> ----
> My configure command is:
> CC=cc CXX=CC FC=ftn ./configure --enable-everything
>
> Result is:
> Library Features:
>   adaptive mesh refinement......... : yes
>   blocked matrix/vector storage.... : yes
>   complex variables................ : no
>   example suite.................... : yes
>   ghosted vectors.................. : yes
>   high-order shape functions....... : yes
>   id size (boundaries)............. : 2 bytes
>   id size (dofs)................... : 4 bytes
>   id size (processors)............. : 2 bytes
>   id size (subdomains)............. : 2 bytes
>   infinite elements................ : yes
>   Dirichlet constraints............ : yes
>   node constraints................. : yes
>   parallel mesh.................... : no
>   performance logging.............. : yes
>   periodic boundary conditions..... : yes
>   reference counting............... : yes
>   shape function 2nd derivatives... : yes
>   stack trace files................ : yes
>   variational smoother............. : yes
>   xdr binary I/O................... : yes
>   providing libMesh::CommWorld..... : yes ***LEGACY FEATURE***
>
> Optional Packages:
>   boost............................ : yes
>   cppunit.......................... : no
>   eigen............................ : yes
>   exodus........................... : yes
>      version....................... : v5.22
>   fparser.......................... : yes
>      build from version............ : release
>   glpk............................. : no
>   gmv.............................. : yes
>   gzstream......................... : yes
>   hdf5............................. : no
>   laspack.......................... : yes
>   libhilbert....................... : yes
>   metis............................ : yes
>   mpi.............................. : yes
>   nanoflann........................ : yes
>   nemesis.......................... : yes
>      version....................... : v5.22
>   netcdf........................... : yes
>      version....................... : 4
>   openmp........................... : yes
>   parmetis......................... : yes
>   petsc............................ : yes
>      version....................... : 3.3.0
>   sfcurves......................... : yes
>   slepc............................ : no
>   tbb.............................. : no
>   c++ threads...................... : no
>   c++ rtti ........................ : yes
>   tecio............................ : yes
>   tecplot...(vendor binaries)...... : no
>   tetgen........................... : yes
>   triangle......................... : yes
>   trilinos......................... : no
>   vtk.............................. : no
>
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-- 
Jim Fonseca, PhD
Research Scientist
Network for Computational Nanotechnology
Purdue University
765-496-6495
www.jimfonseca.com