Lep-MAP2 Discussion

Linkage map construction suite

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General Discussion

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Topic	Posts	Views	Last Post
Pedigree file By Xochitl Granados on Thu Sep 28, 2023 07:01 PM	1	50	By Xochitl Granados on Thu Sep 28, 2023 07:01 PM
Lep-MAP2 discussion is closed! By Pasi Rastas on Thu Mar 21, 2019 07:07 AM	1	122	By Pasi Rastas on Thu Mar 21, 2019 07:07 AM
General questions - JoinSingles2All and # SeparateChromosomes2 By Natália Mendes on Thu Jan 31, 2019 12:50 PM	2	146	By Pasi Rastas on Thu Mar 21, 2019 07:05 AM
OrderMarkers By rtadmorl on Wed Jan 13, 2016 12:25 PM	5	982	By Yuqing Jin on Mon Nov 05, 2018 04:03 PM
Vcf to .linkage By Saurav Baral on Thu Jan 12, 2017 03:46 PM	12	1269	By Pasi Rastas on Mon May 07, 2018 05:46 AM
LM3 general questions By krishna on Wed Mar 21, 2018 05:02 PM	3	168	By Pasi Rastas on Thu Mar 22, 2018 07:49 AM
JoinSingles: Cannot load map file generated by SeparateChromosomes By Jose Andres on Tue Jan 30, 2018 07:30 PM	2	148	By Pasi Rastas on Tue Mar 06, 2018 10:46 AM
Correcting noise in genetic map By Homa on Wed Oct 04, 2017 11:20 AM	2	190	By Pasi Rastas on Thu Nov 09, 2017 09:16 AM
Sex averaged map By Homa on Sun Jun 25, 2017 09:58 AM	4	316	By Pasi Rastas on Sat Jul 29, 2017 09:10 PM
charting maps By rtadmorl on Tue Jul 05, 2016 07:50 AM	6	863	By Stephen Trevoy on Wed May 03, 2017 07:45 PM
All markers marked as duplicates in the final output By Sheldon89 on Sat Apr 15, 2017 05:20 PM	2	248	By Pasi Rastas on Tue Apr 18, 2017 08:39 AM
Limits on pedigree complexity By Joshua Penalba on Mon Mar 20, 2017 01:23 PM	4	330	By Joshua Penalba on Wed Mar 22, 2017 05:40 PM
Order of markers with same map position By Homa on Wed Sep 14, 2016 06:16 PM	5	526	By Homa on Wed Feb 08, 2017 10:50 AM
on output file of the "OrderMarkers" module By Jian-Feng Mao on Sat Jan 21, 2017 07:04 AM	3	325	By Jian-Feng Mao on Sat Feb 04, 2017 11:44 AM
good practice to construct a genetic map with Lep-map By Jian-Feng Mao on Sat Jan 21, 2017 07:55 AM	2	1025	By Pasi Rastas on Tue Jan 24, 2017 09:27 AM
CP population By Shenfei on Thu Dec 29, 2016 01:17 PM	4	450	By Pasi Rastas on Mon Jan 23, 2017 02:35 PM
Lepmap2 vs CRIMAP By Homa on Wed Jan 11, 2017 09:40 AM	2	368	By Pasi Rastas on Fri Jan 13, 2017 09:24 AM
QTL mapping and phase info By Sean Stankowski on Wed Oct 19, 2016 09:25 PM	6	543	By Sean Stankowski on Mon Oct 31, 2016 09:43 PM
Is Lep-MAP2 suitable for plant genetic mapping? By Chenxi Zhou on Mon Nov 30, 2015 09:31 AM	7	641	By Federico Calboli on Thu Oct 20, 2016 08:33 AM
Pair-wise LOD plot By Homa on Tue Aug 30, 2016 07:28 AM	5	867	By Pasi Rastas on Fri Sep 02, 2016 02:05 PM
Phase Information By Kris Christensen on Tue Mar 15, 2016 09:21 PM	6	692	By Matt Rockman on Wed Aug 17, 2016 05:13 PM
Difference between LG = 1 and LG = 1.1 By Sheina on Wed Aug 03, 2016 02:58 AM	3	406	By Pasi Rastas on Wed Aug 10, 2016 07:08 AM
ZLimit in lepmap2 and filtering By Homa on Tue Aug 09, 2016 09:30 AM	2	356	By Pasi Rastas on Wed Aug 10, 2016 07:00 AM
minError parameter By john on Thu Aug 04, 2016 05:05 PM	2	335	By Pasi Rastas on Wed Aug 10, 2016 06:51 AM
Not all markers being utilized? By john on Thu Jul 14, 2016 06:33 PM	3	323	By john on Thu Aug 04, 2016 04:38 PM

1 2 > >> (Page 1 of 2)

Lep-MAP2 Discussion

Linkage map construction suite

Forums

Help

General Discussion

Pedigree file

Lep-MAP2 discussion is closed!

General questions - JoinSingles2All and # SeparateChromosomes2

OrderMarkers

Vcf to .linkage

LM3 general questions

JoinSingles: Cannot load map file generated by SeparateChromosomes

Correcting noise in genetic map

Sex averaged map

charting maps

All markers marked as duplicates in the final output

Limits on pedigree complexity

Order of markers with same map position

on output file of the "OrderMarkers" module

good practice to construct a genetic map with Lep-map

CP population

Lepmap2 vs CRIMAP

QTL mapping and phase info

Is Lep-MAP2 suitable for plant genetic mapping?

Pair-wise LOD plot

Phase Information

Difference between LG = 1 and LG = 1.1

ZLimit in lepmap2 and filtering

minError parameter

Not all markers being utilized?

Lep-MAP2 Discussion

Linkage map construction suite

Forums

Help

General Discussion document.SUBSCRIPTION_OPTIONS = { "thing": "forum", "subscribed": false, "url": "subscribe_to_forum", "icon": { "css": "fa fa-envelope-o" } };

General Discussion