Lep-MAP

fast and accurate linkage map construction for large SNP datasets

Brought to you by: lep-map

Downloads: 0 This Week

Last Update: 2014-06-16

Get an email when there's a new version of Lep-MAP

Lep-MAP is a novel linkage map construction software.

Note there is a new version, Lep-MAP2 available in https://sourceforge.net/projects/lepmap2/

Also note a bug in Lep-MAP: genotype alleles should be given in numerical order like "1 2", not as "2 1".

If you use Lep-MAP, please cite
Lep-MAP: fast and accurate linkage map construction for large SNP datasets
Pasi Rastas; Lars Paulin; Ilkka Hanski; Rainer Lehtonen; Petri Auvinen
Bioinformatics 2013; doi: 10.1093/bioinformatics/btt563

Project Activity

See All Activity >

Follow Lep-MAP

Lep-MAP Web Site

Other Useful Business Software

Custom VMs From 1 to 96 vCPUs With 99.95% Uptime Icon

Custom VMs From 1 to 96 vCPUs With 99.95% Uptime

General-purpose, compute-optimized, or GPU/TPU-accelerated. Built to your exact specs.

Live migration and automatic failover keep workloads online through maintenance. One free e2-micro VM every month.

Try Free

Rate This Project

Login To Rate This Project

User Reviews

Be the first to post a review of Lep-MAP!

Additional Project Details

Registered

2013-05-14

Report inappropriate content

MongoDB Atlas runs apps anywhere

Deploy in 115+ regions with the modern database for every enterprise.

MongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.

Start Free

Recommended Projects

Blocking Map for Java
Map based synchronizer
TASSEL
TASSEL is a bioinformatics software package
CevoMapGen
Custom Map File Generator for C-evo
map2bsb
converts proprietary .map chart files into bsb (.kap) chart files
Lep-MAP3
Lep-MAP3 is a novel and free software for linkage mapping. It can construct linkage maps on very large number of markers and individuals on single or multiple families. Especially, it supports whole genome sequencing data even with low sequencing depth. If you use Lep-MAP3, please cite P. Rastas. Lep-MAP3: Robust linkage mapping even for low-coverage whole genome sequencing data, Bioinformatics. 2017, 33(23):3726-3732. https://doi.org/10.1093/bioinformatics/btx494. Please note Lep-Anchor for anchoring genomes with Lep-MAP3 linkage maps http://sourceforge.net/projects/lep-anchor