[Ldhat-help] lookup table

[Yogendra K. <ykh...@gm...>]

Hi,
I have *631* individuals and would like to generate lookup table for
recombination estimation.
Could you please suggest me how can I generate new lookup table for 631
individuals.
I tried rhomap using existing lookup table, but it doesn't work.

./rhomap -seq chr1.ldhat.sites -loc chr1.ldhat.locs -lk lk_n192_t0.001

Starting rate estimation
Seed = -1444335004

How many updates for MCMC? 1000

Number of updates between samples:10

Input number of Burn In iterations:1000

Analysing 631 genotypes of length 776 seg sites
Reading sequences in fasta format
Run-time error...
Likelihood file for different no. seqs than data
...now exiting to system...
Bye!

Thanks in advance!

Regards,
Yogendra