Re: [Laika-talk] UMLS database

[Robert M. <rmc...@mi...>]

Earl,

If you navigate to 
/var/lib/tomcat5/webapps/validation-0.1-SNAPSHOT/WEB-INF/laika-data.xml,
there is an entire section of the XML commented out for setting up the UMLS
database setting.  

You should be able to set the credentials in this file to your settings that
you used when creating UMLS.  You will then need to restart Tomcat, but this
should do the trick.  FYI, you will not need to restart the Laika Ruby on
Rails instance.

---
Rob McCready


On 9/3/08 2:33 PM, "Earl Evans" <ee...@cc...> wrote:

> Hi Rob,
>  
> We now have the UMLS database loaded into MySQL on our Laika Linux server.
>  
> I have looked at the file that Rob Dingwell referenced, and it¹s not clear to
> me what parts need to be altered/uncommented.  Would it be possible to set up
> a meeting for us to walk through the activation and test of the UMLS
> functionality?
>  
> Thanks,
>  
> - Earl
>  
> Earl Evans
> IT Services, CCHIT
> Certification Commission for Healthcare Information Technology
> 503.840.5729
> ee...@cc...
>  
>  
>  
>  
> 
> From: Dingwell, Robert A. (BOBD) [mailto:bo...@mi...]
> Sent: Tuesday, August 26, 2008 10:24 AM
> To: Robert McCready; ta...@pr...
> Cc: Earl Evans
> Subject: Re: [Laika-talk] UMLS database
>  
> This is not a matter of just putting the UMLS data files somewhere on the
> system but actually installing the UMLS system in a MySQL database.  NLM
> provides a tool called MetamorphoSys which can generate the MySQL load
> scripts, the scripts then need to be executed, this will take day+ to perform.
> Once installed the the validator can be configured by uncommenting the umls
> sections in the laika-data.xml file located in the  WEB-INF directory and
> setting the correct database parameters in the same file.
> 
> 
> Rob
> 
> 
> On 8/25/08 4:07 PM, "Robert McCready" <rmc...@mi...> wrote:
> Rob D,
> 
> I 99% certain this a configuration setting in the CCD/C32 validator only, but
> wanted to vet this past you first.  If correct, could you point out which
> file/setting in the expanded .war file Earl should edit?
> 
> ---
> Rob McC.
> 
> 
> On 8/25/08 4:00 PM, "Earl Evans" <ee...@cc...> wrote:
> Hi Rob,
>  
> I am uploading the UMLS database to our Laika server.  Can you tell me where
> the files need to go in order for Laika to automatically use the UMLS
> databases for validation?
>  
> Thanks,
>  
> - Earl
>  
>  
>  
> 
> 
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